RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 NCF1CA8MVU1 366 aaPredicted RBP17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 RNF103O00237 685 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PLOD2O00469 737 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 DENRO43583 198 aaKnown RBP17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 NCF1P14598 390 aaPredicted RBP17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CES1P23141 567 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 EN1Q05925 392 aaPredicted RBP17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SLC13A2Q13183 592 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 RAB39AQ14964 217 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 BROXQ5VW32 411 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PDZD4Q76G19 769 aaPredicted RBP17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 FSD1LQ9BXM9 530 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ZNF696Q9H7X3 374 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 POU2F3Q9UKI9 436 aa17.23■□□□□ 0.35
TRAF3IP1-202ENST00000391993 DUOX1Q9NRD9 1551 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 HNRNPDQ14103 355 aaKnown RBP17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 LRRC38Q5VT99 294 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SLC41A1Q8IVJ1 513 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 LILRA2Q8N149 483 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ZNF516Q92618 1163 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CERS2Q96G23 380 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PRRG3Q9BZD7 231 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 POMKQ9H5K3 350 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SNX8Q9Y5X2 465 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 MTHFD1P11586 935 aaKnown RBP17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CCND2P30279 289 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CPOXP36551 454 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 KPNA2P52292 529 aaKnown RBP17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CTBP1Q13363 440 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PMS2P3Q13401 168 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ZNF846Q147U1 533 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PLD6Q8N2A8 252 aaKnown RBP17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 FBXO30Q8TB52 745 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SUN5Q8TC36 379 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 UBASH3BQ8TF42 649 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 C8orf37Q96NL8 207 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 THUMPD3Q9BV44 507 aaKnown RBP17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PCDHA11Q9Y5I1 949 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 AURKAO14965 403 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ARHGEF9O43307 516 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 TSPAN3O60637 253 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 FGF3P11487 239 aaPredicted RBP17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CNTFP26441 200 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 TTKP33981 857 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 INPP1P49441 399 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 MBLAC2Q68D91 279 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ACOT1Q86TX2 421 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SLC22A16Q86VW1 577 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 KCTD14Q9BQ13 255 aaPredicted RBP17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 LRRC4Q9HBW1 653 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 VANGL2Q9ULK5 521 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CARD8Q9Y2G2 431 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 RAP2CQ9Y3L5 183 aa17.22■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ATP5BP06576 529 aaKnown RBP17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SNRPB2P08579 225 aaKnown RBP17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 KCNMB4Q86W47 210 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 RELL1Q8IUW5 271 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 FIBCD1Q8N539 461 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 HTR3CQ8WXA8 447 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 KLHL32Q96NJ5 620 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CNOT6Q9ULM6 557 aaKnown RBP17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CHD4Q14839 1912 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 H3BNH8 94 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 RSL1D1O76021 490 aaKnown RBP17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 TRUB2O95900 331 aaKnown RBP17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CYP4B1P13584 511 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 MERTKQ12866 999 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CHSY3Q70JA7 882 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 FIG4Q92562 907 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 MFSD3Q96ES6 412 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 GLT1D1Q96MS3 346 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 TBCDQ9BTW9 1192 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 LRRC40Q9H9A6 602 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SIAEQ9HAT2 523 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 NRBP2Q9NSY0 501 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ZDHHC7Q9NXF8 308 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 UBA6A0AVT1 1052 aaPredicted RBP17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 C7orf72A4D263 438 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 KRBA1A5PL33 1030 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 KLF11O14901 512 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 KCNA2P16389 499 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 TIGD2Q4W5G0 525 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CLEC6AQ6EIG7 209 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 POPDC2Q9HBU9 364 aa17.21■□□□□ 0.35
TRAF3IP1-202ENST00000391993 DFFAO00273 331 aa17.2■□□□□ 0.34
TRAF3IP1-202ENST00000391993 PTP4A2Q12974 167 aa17.2■□□□□ 0.34
TRAF3IP1-202ENST00000391993 VPS26BQ4G0F5 336 aa17.2■□□□□ 0.34
TRAF3IP1-202ENST00000391993 NIPAL1Q6NVV3 410 aa17.2■□□□□ 0.34
TRAF3IP1-202ENST00000391993 SPESP1Q6UW49 350 aa17.2■□□□□ 0.34
TRAF3IP1-202ENST00000391993 PLD5Q8N7P1 536 aa17.2■□□□□ 0.34
TRAF3IP1-202ENST00000391993 GIPC2Q8TF65 315 aa17.2■□□□□ 0.34
TRAF3IP1-202ENST00000391993 SNRNP25Q9BV90 132 aaKnown RBP17.2■□□□□ 0.34
TRAF3IP1-202ENST00000391993 INIPQ9NRY2 104 aa17.2■□□□□ 0.34
TRAF3IP1-202ENST00000391993 PLK2Q9NYY3 685 aa17.2■□□□□ 0.34
TRAF3IP1-202ENST00000391993 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.2■□□□□ 0.34
TRAF3IP1-202ENST00000391993 IFI30P13284 250 aa17.2■□□□□ 0.34
TRAF3IP1-202ENST00000391993 GSTM4Q03013 218 aa17.2■□□□□ 0.34
TRAF3IP1-202ENST00000391993 PCLAFQ15004 111 aa17.2■□□□□ 0.34
TRAF3IP1-202ENST00000391993 NOMO1Q15155 1222 aa17.2■□□□□ 0.34
TRAF3IP1-202ENST00000391993 GOLGA7BQ2TAP0 167 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms