RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 WFDC5Q8TCV5 224 aa12.42□□□□□ -0.42
SPTBN1-203ENST00000389980 SH3RF2Q8TEC5 729 aa12.42□□□□□ -0.42
SPTBN1-203ENST00000389980 TMA16Q96EY4 203 aaKnown RBP12.42□□□□□ -0.42
SPTBN1-203ENST00000389980 ZSWIM3Q96MP5 696 aa12.42□□□□□ -0.42
SPTBN1-203ENST00000389980 DDX50Q9BQ39 737 aaKnown RBP12.42□□□□□ -0.42
SPTBN1-203ENST00000389980 PRKD2Q9BZL6 878 aa12.42□□□□□ -0.42
SPTBN1-203ENST00000389980 SYBUQ9NX95 663 aa12.42□□□□□ -0.42
SPTBN1-203ENST00000389980 MSRAQ9UJ68 235 aa12.42□□□□□ -0.42
SPTBN1-203ENST00000389980 LSM7Q9UK45 103 aaKnown RBP12.42□□□□□ -0.42
SPTBN1-203ENST00000389980 TCRBV9S1A1TA0A576 114 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 HMGB1P1B2RPK0 211 aaPredicted RBP12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 PRAMEF11O60813 436 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 PMPCBO75439 489 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 C1RP00736 705 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 HNRNPA1P09651 372 aaKnown RBP eCLIP12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 CEBPBP17676 345 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 TPH1P17752 444 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 HOXA9P31269 272 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 RENBPP51606 427 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 GNGT1P63211 74 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 IHHQ14623 411 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 SMAD1Q15797 465 aaKnown RBP12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 AGBL2Q5U5Z8 902 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 RNF219Q5W0B1 726 aaPredicted RBP12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 PDE12Q6L8Q7 609 aaKnown RBP12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 HTR3DQ70Z44 454 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 CHST9Q7L1S5 443 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 PRPF39Q86UA1 669 aaKnown RBP12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 IPMKQ8NFU5 416 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 VN1R2Q8NFZ6 395 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 XPO6Q96QU8 1125 aaKnown RBP12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 CCDC77Q9BR77 488 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 APOL5Q9BWW9 433 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 ROPN1BQ9BZX4 212 aaPredicted RBP12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 MAGEH1Q9H213 219 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 IGFLR1Q9H665 355 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 SLC28A3Q9HAS3 691 aa12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 ROPN1Q9HAT0 212 aaPredicted RBP12.41□□□□□ -0.42
SPTBN1-203ENST00000389980 H0Y626 953 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 GFRA2O00451 464 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 MUSKO15146 869 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 CACNG3O60359 315 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 SUN1O94901 812 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 PRAMEF12O95522 483 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 AGTP01019 485 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 MZF1P28698 734 aaPredicted RBP12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 MMP13P45452 471 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 DSC2Q02487 901 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 IL10RBQ08334 325 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 NIPAL4Q0D2K0 466 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 PRPSAP1Q14558 356 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 LBRQ14739 615 aaKnown RBP12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 PRSS36Q5K4E3 855 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 CERCAMQ5T4B2 595 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 CES3Q6UWW8 571 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 UNC5AQ6ZN44 842 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 DNAAF3Q8N9W5 541 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 TDRD5Q8NAT2 981 aaKnown RBP12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 DDI1Q8WTU0 396 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 USP13Q92995 863 aaPredicted RBP12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 PGM2Q96G03 612 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 FCRL5Q96RD9 977 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 EBNA1BP2Q99848 306 aaKnown RBP12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 CAPS2Q9BXY5 557 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 MUC3BQ9H195 1237 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 PDFQ9HBH1 243 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 ATP13A1Q9HD20 1204 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 CDH22Q9UJ99 828 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 CLEC4EQ9ULY5 219 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 ARHGAP26Q9UNA1 814 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 TBC1D30Q9Y2I9 924 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 PRUNE2Q8WUY3 3088 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 MYLKQ15746 1914 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 ILVBLA1L0T0 632 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 SDR42E2A6NKP2 422 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 CBX4O00257 560 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 TCEA3O75764 348 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 LATS1O95835 1130 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 MLNP12872 115 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 PHBP35232 272 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 CBLBQ13191 982 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 PCSK7Q16549 785 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 DUSP6Q16828 381 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 ARHGAP15Q53QZ3 475 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 RTL10Q7L3V2 364 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 UNC5BQ8IZJ1 945 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 HJURPQ8NCD3 748 aaPredicted RBP12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 ITFG1Q8TB96 612 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 NSMCE1Q8WV22 266 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 TLCD1Q96CP7 247 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 FICDQ9BVA6 458 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 TASP1Q9H6P5 420 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 PIDD1Q9HB75 910 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 ZDHHC7Q9NXF8 308 aa12.4□□□□□ -0.42
SPTBN1-203ENST00000389980 ATP9BO43861 1147 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 SNAP91O60641 907 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 NR1D1P20393 614 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 CD86P42081 329 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 OXCT1P55809 520 aa12.39□□□□□ -0.43
SPTBN1-203ENST00000389980 TMED2Q15363 201 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms