RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 SLC39A10Q9ULF5 831 aa2.7□□□□□ -1.98
RNU6-1040P-201ENST00000383974 PCDHA10Q9Y5I2 948 aa2.7□□□□□ -1.98
RNU6-1040P-201ENST00000383974 MST1RQ04912 1400 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 IGLV5-37A0A075B6J1 123 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 SAA2-SAA4A0A096LPE2 208 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 DYTNA2CJ06 578 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 FAM90A18PA6NE21 464 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 FAM90A16PA6NEW6 464 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 DDTLA6NHG4 134 aaPredicted RBP2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 FAM90A9PA6NNJ1 464 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 FAM90A5PA8MXJ8 464 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 KDM4EB2RXH2 506 aaPredicted RBP2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 EYA2O00167 538 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 RNMTO43148 476 aaKnown RBP2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 LMX1BO60663 402 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 PLA2G6O60733 806 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 DDAH2O95865 285 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 MMP3P08254 477 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 FAM90A15PP0C7V4 464 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 FAM90A14PP0C7W9 464 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 AMD1P17707 334 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 GSTM2P28161 218 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 RFC1P35251 1148 aaPredicted RBP2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 GLIPR1P48060 266 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 ARL16Q0P5N6 197 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 LONRF1Q17RB8 773 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 ZACNQ401N2 412 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 IZUMO3Q5VZ72 239 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 ADAM5Q6NVV9 412 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 MTFR2Q6P444 385 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 WDR5BQ86VZ2 330 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 GATAD2AQ86YP4 633 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 NAGSQ8N159 534 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 LMNTD1Q8N9Z9 388 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 POC1AQ8NBT0 407 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 C2CD4CQ8TF44 421 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 KIAA1191Q96A73 305 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 TMEM18Q96B42 140 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 TRIM31Q9BZY9 425 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 SEPSECSQ9HD40 501 aaKnown RBP2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 LIN7CQ9NUP9 197 aaKnown RBP2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 OSGIN2Q9Y236 505 aa2.69□□□□□ -1.98
RNU6-1040P-201ENST00000383974 A0A0U1RQJ8 604 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 TMEM247A6NEH6 219 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 NPIPB13A6NJU9 1138 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 AQP12BA6NM10 295 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 NPIPB5A8MRT5 1133 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 NPIPB4C9JG80 1138 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 PRAC2D3DTV9 90 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 NPIPB11E5RHQ5 1161 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 TULP2O00295 520 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 XPNPEP2O43895 674 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 PAK4O96013 591 aaPredicted RBP2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 PCP4P48539 62 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 TYW3Q6IPR3 259 aaKnown RBP2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 RHBDF2Q6PJF5 856 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 C9orf139Q6ZV77 190 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 EXOC3L1Q86VI1 746 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 FMNL3Q8IVF7 1028 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 ZNF114Q8NC26 417 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 RFWD2Q8NHY2 731 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 GPT2Q8TD30 523 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 KCNJ9Q92806 393 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 MUL1Q969V5 352 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 EPYCQ99645 322 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 NPFFR1Q9GZQ6 430 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 SLC22A11Q9NSA0 550 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 UPB1Q9UBR1 384 aa2.68□□□□□ -1.98
RNU6-1040P-201ENST00000383974 TIMM23O14925 209 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 CLGNO14967 610 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 SERPINB2P05120 415 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 CKMT1AP12532 417 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 LYL1P12980 280 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 CRIP2P52943 208 aaPredicted RBP2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 DLG1Q12959 904 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 HDAC1Q13547 482 aaPredicted RBP2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 ALKBH1Q13686 389 aaKnown RBP2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 DHX34Q14147 1143 aaKnown RBP2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 SETMARQ53H47 684 aaPredicted RBP2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 XKR9Q5GH70 373 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 PMS2CLQ68D20 193 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 PATL1Q86TB9 770 aaKnown RBP2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 SCN4BQ8IWT1 228 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 RBFAQ8N0V3 343 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 OR1N1Q8NGS0 311 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 NEK9Q8TD19 979 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 SLC2A12Q8TD20 617 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 STYXQ8WUJ0 223 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 SECTM1Q8WVN6 248 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 TAF15Q92804 592 aaKnown RBP eCLIP2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 BICD1Q96G01 975 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 UHRF2Q96PU4 802 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 CADM1Q9BY67 442 aaKnown RBP2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 ABHD16BQ9H3Z7 469 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 ACAD9Q9H845 621 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 CLK4Q9HAZ1 481 aaKnown RBP2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 KLHL42Q9P2K6 505 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 RCE1Q9Y256 329 aa2.67□□□□□ -1.98
RNU6-1040P-201ENST00000383974 SLC45A1Q9Y2W3 748 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms