RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 SZT2Q5T011 3432 aa27.29■■□□□ 1.96
MSX1-201ENST00000382723 E7ESA3 106 aa27.29■■□□□ 1.96
MSX1-201ENST00000382723 EIF3HO15372 352 aaKnown RBP eCLIP27.29■■□□□ 1.96
MSX1-201ENST00000382723 CACNG3O60359 315 aa27.29■■□□□ 1.96
MSX1-201ENST00000382723 IGFBP4P22692 258 aa27.29■■□□□ 1.96
MSX1-201ENST00000382723 ADGRE1Q14246 886 aa27.29■■□□□ 1.96
MSX1-201ENST00000382723 LY6G5CQ5SRR4 150 aa27.29■■□□□ 1.96
MSX1-201ENST00000382723 CAPN12Q6ZSI9 719 aa27.29■■□□□ 1.96
MSX1-201ENST00000382723 ADGRG2Q8IZP9 1017 aa27.29■■□□□ 1.96
MSX1-201ENST00000382723 PGBD5Q8N414 524 aa27.29■■□□□ 1.96
MSX1-201ENST00000382723 FBXO36Q8NEA4 188 aa27.29■■□□□ 1.96
MSX1-201ENST00000382723 PYROXD1Q8WU10 500 aa27.29■■□□□ 1.96
MSX1-201ENST00000382723 WDR83Q9BRX9 315 aaKnown RBP27.29■■□□□ 1.96
MSX1-201ENST00000382723 PHACTR1Q9C0D0 580 aa27.29■■□□□ 1.96
MSX1-201ENST00000382723 XAB2Q9HCS7 855 aaKnown RBP27.29■■□□□ 1.96
MSX1-201ENST00000382723 OR51B4Q9Y5P0 310 aa27.29■■□□□ 1.96
MSX1-201ENST00000382723 TTC24A2A3L6 582 aaPredicted RBP27.28■■□□□ 1.96
MSX1-201ENST00000382723 AGPSO00116 658 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 SLC9A3R1O14745 358 aaPredicted RBP27.28■■□□□ 1.96
MSX1-201ENST00000382723 LMAN2Q12907 356 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 KCTD11Q693B1 232 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 LINGO4Q6UY18 593 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 APCDD1Q8J025 514 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 MICALL1Q8N3F8 863 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 FIBINQ8TAL6 211 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 S1PR5Q9H228 398 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 DUS2Q9NX74 493 aaKnown RBP27.28■■□□□ 1.96
MSX1-201ENST00000382723 CHMP2BQ9UQN3 213 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 GOLGA6CA6NDK9 693 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 SHBGP04278 402 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 GOLGA6DP0CG33 693 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 CD70P32970 193 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 ELK3P41970 407 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 ARF5P84085 180 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 IGDCC3Q8IVU1 814 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 AGGF1Q8N302 714 aaeCLIP27.28■■□□□ 1.96
MSX1-201ENST00000382723 OTUB2Q96DC9 234 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 ALG14Q96F25 216 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 FAM161BQ96MY7 647 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 APOL2Q9BQE5 337 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 GOLGA6AQ9NYA3 693 aa27.28■■□□□ 1.96
MSX1-201ENST00000382723 KIAA1522Q9P206 1035 aaPredicted RBP27.28■■□□□ 1.96
MSX1-201ENST00000382723 AAR2Q9Y312 384 aaKnown RBP27.28■■□□□ 1.96
MSX1-201ENST00000382723 ANXA9O76027 345 aa27.27■■□□□ 1.96
MSX1-201ENST00000382723 PENKP01210 267 aaPredicted RBP27.27■■□□□ 1.96
MSX1-201ENST00000382723 IFNAR2P48551 515 aa27.27■■□□□ 1.96
MSX1-201ENST00000382723 DSC2Q02487 901 aa27.27■■□□□ 1.96
MSX1-201ENST00000382723 IFFO1Q0D2I5 559 aa27.27■■□□□ 1.96
MSX1-201ENST00000382723 TRIM68Q6AZZ1 485 aa27.27■■□□□ 1.96
MSX1-201ENST00000382723 MTERF4Q7Z6M4 381 aaKnown RBP27.27■■□□□ 1.96
MSX1-201ENST00000382723 SLC25A51Q9H1U9 297 aa27.27■■□□□ 1.96
MSX1-201ENST00000382723 CDH7Q9ULB5 785 aa27.27■■□□□ 1.96
MSX1-201ENST00000382723 NFS1Q9Y697 457 aa27.27■■□□□ 1.96
MSX1-201ENST00000382723 MYO18AQ92614 2054 aaKnown RBP27.26■■□□□ 1.95
MSX1-201ENST00000382723 ERI2A8K979 691 aaKnown RBP27.26■■□□□ 1.95
MSX1-201ENST00000382723 MUSKO15146 869 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 TYRP14679 529 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 SESN2P58004 480 aaPredicted RBP27.26■■□□□ 1.95
MSX1-201ENST00000382723 DNAJC21Q5F1R6 531 aaKnown RBP27.26■■□□□ 1.95
MSX1-201ENST00000382723 RNF43Q68DV7 783 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 LRRC8BQ6P9F7 803 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 IPMKQ8NFU5 416 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 OR52K1Q8NGK4 314 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 BPIFB1Q8TDL5 484 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 TTC25Q96NG3 672 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 CINPQ9BW66 212 aaPredicted RBP27.26■■□□□ 1.95
MSX1-201ENST00000382723 LRRC40Q9H9A6 602 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 ABCB8Q9NUT2 735 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 VPS51Q9UID3 782 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 A0A1W2PPC1 479 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 PMPCBO75439 489 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 ZMPSTE24O75844 475 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 SUN1O94901 812 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 MAGEA3P43357 314 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 TNK2Q07912 1038 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 NIPAL4Q0D2K0 466 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 CTC1Q2NKJ3 1217 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 BBS5Q8N3I7 341 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 OSCP1Q8WVF1 389 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 VPS37BQ9H9H4 285 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 LRRC4CQ9HCJ2 640 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 SEPT3Q9UH03 358 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 TEX264Q9Y6I9 313 aa27.26■■□□□ 1.95
MSX1-201ENST00000382723 PRRC2BQ5JSZ5 2229 aaKnown RBP27.25■■□□□ 1.95
MSX1-201ENST00000382723 HEPACAM2A8MVW5 462 aa27.25■■□□□ 1.95
MSX1-201ENST00000382723 GJB3O75712 270 aa27.25■■□□□ 1.95
MSX1-201ENST00000382723 NUDT17P0C025 328 aa27.25■■□□□ 1.95
MSX1-201ENST00000382723 CD86P42081 329 aa27.25■■□□□ 1.95
MSX1-201ENST00000382723 GEMP55040 296 aa27.25■■□□□ 1.95
MSX1-201ENST00000382723 MLLT1Q03111 559 aaPredicted RBP27.25■■□□□ 1.95
MSX1-201ENST00000382723 CCDC38Q502W7 563 aa27.25■■□□□ 1.95
MSX1-201ENST00000382723 LRIG3Q6UXM1 1119 aa27.25■■□□□ 1.95
MSX1-201ENST00000382723 PALM2Q8IXS6 379 aa27.25■■□□□ 1.95
MSX1-201ENST00000382723 MPP5Q8N3R9 675 aa27.25■■□□□ 1.95
MSX1-201ENST00000382723 DCAF4L2Q8NA75 395 aa27.25■■□□□ 1.95
MSX1-201ENST00000382723 IMP4Q96G21 291 aaKnown RBP27.25■■□□□ 1.95
MSX1-201ENST00000382723 POLR1EQ9GZS1 481 aaKnown RBP27.25■■□□□ 1.95
MSX1-201ENST00000382723 PSMD3O43242 534 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 MLNP12872 115 aa27.24■■□□□ 1.95
MSX1-201ENST00000382723 RFTN1Q14699 578 aaPredicted RBP27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms