RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 SNX32Q86XE0 403 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 ICA1LQ8NDH6 482 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 EDEM1Q92611 657 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 RNF34Q969K3 372 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 PPP1R36Q96LQ0 422 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 CENPKQ9BS16 269 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 C1QTNF1Q9BXJ1 281 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 TSPYL2Q9H2G4 693 aaPredicted RBP16.59■□□□□ 0.25
VPS16-203ENST00000380469 STK39Q9UEW8 545 aa16.59■□□□□ 0.25
VPS16-203ENST00000380469 AAR2Q9Y312 384 aaKnown RBP16.59■□□□□ 0.25
VPS16-203ENST00000380469 MYBPHLA2RUH7 354 aa16.58■□□□□ 0.25
VPS16-203ENST00000380469 CASQ2O14958 399 aaPredicted RBP16.58■□□□□ 0.25
VPS16-203ENST00000380469 PHGDHO43175 533 aaKnown RBP16.58■□□□□ 0.25
VPS16-203ENST00000380469 LRIG2O94898 1065 aa16.58■□□□□ 0.25
VPS16-203ENST00000380469 COL6A2P12110 1019 aa16.58■□□□□ 0.25
VPS16-203ENST00000380469 VCLP18206 1134 aa16.58■□□□□ 0.25
VPS16-203ENST00000380469 DNAJB1P25685 340 aa16.58■□□□□ 0.25
VPS16-203ENST00000380469 CXCR3P49682 368 aa16.58■□□□□ 0.25
VPS16-203ENST00000380469 AQP4P55087 323 aa16.58■□□□□ 0.25
VPS16-203ENST00000380469 RPL26P61254 145 aaKnown RBP16.58■□□□□ 0.25
VPS16-203ENST00000380469 ROR2Q01974 943 aaKnown RBP16.58■□□□□ 0.25
VPS16-203ENST00000380469 MMEL1Q495T6 779 aa16.58■□□□□ 0.25
VPS16-203ENST00000380469 TMC7Q7Z402 723 aa16.58■□□□□ 0.25
VPS16-203ENST00000380469 PLEKHH3Q7Z736 793 aa16.58■□□□□ 0.25
VPS16-203ENST00000380469 MFN1Q8IWA4 741 aa16.58■□□□□ 0.25
VPS16-203ENST00000380469 PCED1BQ96HM7 432 aa16.58■□□□□ 0.25
VPS16-203ENST00000380469 CELF6Q96J87 481 aaKnown RBP16.58■□□□□ 0.25
VPS16-203ENST00000380469 ZFP42Q96MM3 310 aa16.58■□□□□ 0.25
VPS16-203ENST00000380469 SLC38A7Q9NVC3 462 aa16.58■□□□□ 0.25
VPS16-203ENST00000380469 BCAP29Q9UHQ4 241 aa16.58■□□□□ 0.25
VPS16-203ENST00000380469 CDYLQ9Y232 598 aa16.58■□□□□ 0.25
VPS16-203ENST00000380469 CCL15-CCL14A0A0B4J2E2 113 aa16.58■□□□□ 0.24
VPS16-203ENST00000380469 CCDC78A2IDD5 438 aa16.58■□□□□ 0.24
VPS16-203ENST00000380469 H3BNX3 289 aa16.58■□□□□ 0.24
VPS16-203ENST00000380469 EPHA3P29320 983 aa16.58■□□□□ 0.24
VPS16-203ENST00000380469 GLRBP48167 497 aa16.58■□□□□ 0.24
VPS16-203ENST00000380469 PSEN2P49810 448 aa16.58■□□□□ 0.24
VPS16-203ENST00000380469 NAGLUP54802 743 aa16.58■□□□□ 0.24
VPS16-203ENST00000380469 ADAM17P78536 824 aa16.58■□□□□ 0.24
VPS16-203ENST00000380469 MSLNQ13421 630 aaPredicted RBP16.58■□□□□ 0.24
VPS16-203ENST00000380469 CCL15Q16663 113 aa16.58■□□□□ 0.24
VPS16-203ENST00000380469 PCID2Q5JVF3 399 aa16.58■□□□□ 0.24
VPS16-203ENST00000380469 RASIP1Q5U651 963 aa16.58■□□□□ 0.24
VPS16-203ENST00000380469 CWF19L1Q69YN2 538 aaKnown RBP16.58■□□□□ 0.24
VPS16-203ENST00000380469 DCLRE1AQ6PJP8 1040 aa16.58■□□□□ 0.24
VPS16-203ENST00000380469 OTOP3Q7RTS5 596 aa16.58■□□□□ 0.24
VPS16-203ENST00000380469 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.58■□□□□ 0.24
VPS16-203ENST00000380469 CPSF7Q8N684 471 aaKnown RBP16.58■□□□□ 0.24
VPS16-203ENST00000380469 TRIM4Q9C037 500 aa16.58■□□□□ 0.24
VPS16-203ENST00000380469 G3BP2Q9UN86 482 aaKnown RBP16.58■□□□□ 0.24
VPS16-203ENST00000380469 ACOT9Q9Y305 439 aa16.58■□□□□ 0.24
VPS16-203ENST00000380469 PTCH2Q9Y6C5 1203 aa16.58■□□□□ 0.24
VPS16-203ENST00000380469 IGFBP6P24592 240 aaPredicted RBP16.57■□□□□ 0.24
VPS16-203ENST00000380469 ADSLP30566 484 aaPredicted RBP16.57■□□□□ 0.24
VPS16-203ENST00000380469 PPARGP37231 505 aaPredicted RBP16.57■□□□□ 0.24
VPS16-203ENST00000380469 AVPR1AP37288 418 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 POLD2P49005 469 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 CSRP3P50461 194 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 ITGA7Q13683 1181 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 GRAMD1BQ3KR37 738 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 NXNQ6DKJ4 435 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 PKN3Q6P5Z2 889 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 DSELQ8IZU8 1212 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 TMEM151AQ8N4L1 468 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 ZMIZ2Q8NF64 920 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 NPLOC4Q8TAT6 608 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 PIP4K2CQ8TBX8 421 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 USP33Q8TEY7 942 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 STYXQ8WUJ0 223 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 ZFAND2BQ8WV99 257 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 KCTD4Q8WVF5 259 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 MOCOSQ96EN8 888 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 NUF2Q9BZD4 464 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 ACSS2Q9NR19 701 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 C6orf203Q9P0P8 240 aaPredicted RBP16.57■□□□□ 0.24
VPS16-203ENST00000380469 ZDHHC2Q9UIJ5 367 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 PSMD13Q9UNM6 376 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 TIMM13Q9Y5L4 95 aaPredicted RBP16.57■□□□□ 0.24
VPS16-203ENST00000380469 SCN4AP35499 1836 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 SHROOM3Q8TF72 1996 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 GRID2O43424 1007 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 AHSGP02765 367 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 ALDH1A3P47895 512 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 ZNF33AQ06730 810 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 PRAMEF19Q5SWL8 479 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 RWDD4Q6NW29 188 aaKnown RBP16.57■□□□□ 0.24
VPS16-203ENST00000380469 BNC2Q6ZN30 1099 aaPredicted RBP16.57■□□□□ 0.24
VPS16-203ENST00000380469 CTU1Q7Z7A3 348 aaKnown RBP16.57■□□□□ 0.24
VPS16-203ENST00000380469 SLC41A1Q8IVJ1 513 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 SMARCD1Q96GM5 515 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 TSGA13Q96PP4 275 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 BTBD9Q96Q07 612 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 CDRT15Q96T59 188 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 TBL1YQ9BQ87 522 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 CDH9Q9ULB4 789 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 ZNF236Q9UL36 1845 aa16.57■□□□□ 0.24
VPS16-203ENST00000380469 NUP205Q92621 2012 aa16.56■□□□□ 0.24
VPS16-203ENST00000380469 DFFAO00273 331 aa16.56■□□□□ 0.24
VPS16-203ENST00000380469 TXNDC9O14530 226 aa16.56■□□□□ 0.24
VPS16-203ENST00000380469 SBK3P0C264 359 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms