RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 UBE2OQ9C0C9 1292 aaKnown RBP23.48■■□□□ 1.35
VPS16-201ENST00000380443 ARNT2Q9HBZ2 717 aa23.48■■□□□ 1.35
VPS16-201ENST00000380443 NDFIP2Q9NV92 336 aa23.48■■□□□ 1.35
VPS16-201ENST00000380443 UBP1Q9NZI7 540 aa23.48■■□□□ 1.35
VPS16-201ENST00000380443 SLC17A6Q9P2U8 582 aa23.48■■□□□ 1.35
VPS16-201ENST00000380443 EMCNQ9ULC0 261 aa23.48■■□□□ 1.35
VPS16-201ENST00000380443 ANKRD6Q9Y2G4 727 aa23.48■■□□□ 1.35
VPS16-201ENST00000380443 HBS1LQ9Y450 684 aaKnown RBP23.48■■□□□ 1.35
VPS16-201ENST00000380443 TTC3P53804 2025 aa23.48■■□□□ 1.35
VPS16-201ENST00000380443 PROCP04070 461 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 YBEYP58557 167 aaPredicted RBP23.47■■□□□ 1.35
VPS16-201ENST00000380443 C10orf120Q5SQS8 335 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 FSTL4Q6MZW2 842 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 RANBP10Q6VN20 620 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 MTDHQ86UE4 582 aaKnown RBP23.47■■□□□ 1.35
VPS16-201ENST00000380443 IPMKQ8NFU5 416 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 SPATA22Q8NHS9 363 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 GABPB2Q8TAK5 448 aaPredicted RBP23.47■■□□□ 1.35
VPS16-201ENST00000380443 SREK1Q8WXA9 508 aaKnown RBP23.47■■□□□ 1.35
VPS16-201ENST00000380443 OVCA2Q8WZ82 227 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 PAWRQ96IZ0 340 aaKnown RBP23.47■■□□□ 1.35
VPS16-201ENST00000380443 APOL2Q9BQE5 337 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 MECRQ9BV79 373 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 FICDQ9BVA6 458 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 STN1Q9H668 368 aaKnown RBP23.47■■□□□ 1.35
VPS16-201ENST00000380443 NOL6Q9H6R4 1146 aaKnown RBP23.47■■□□□ 1.35
VPS16-201ENST00000380443 HEY2Q9UBP5 337 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 LNPEPQ9UIQ6 1025 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 GSRP00390 522 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 TPH1P17752 444 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 NMBRP28336 390 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 MAPKAPK2P49137 400 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 ARPP19P56211 112 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 KRT72Q14CN4 511 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 PARP15Q460N3 678 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 TAF1BQ53T94 588 aaPredicted RBP23.47■■□□□ 1.35
VPS16-201ENST00000380443 DENND5AQ6IQ26 1287 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 UBE2Q1Q7Z7E8 422 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 SKA1Q96BD8 255 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 SEPT5Q99719 369 aaPredicted RBP23.47■■□□□ 1.35
VPS16-201ENST00000380443 FSD1LQ9BXM9 530 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 WWP1Q9H0M0 922 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 C11orf49Q9H6J7 331 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 TCAF1Q9Y4C2 921 aa23.47■■□□□ 1.35
VPS16-201ENST00000380443 TBKBP1A7MCY6 615 aa23.46■■□□□ 1.35
VPS16-201ENST00000380443 SERPINE1P05121 402 aa23.46■■□□□ 1.35
VPS16-201ENST00000380443 APOA4P06727 396 aa23.46■■□□□ 1.35
VPS16-201ENST00000380443 ZBTB16Q05516 673 aa23.46■■□□□ 1.35
VPS16-201ENST00000380443 RNF19BQ6ZMZ0 732 aa23.46■■□□□ 1.35
VPS16-201ENST00000380443 TEX26Q8N6G2 289 aa23.46■■□□□ 1.35
VPS16-201ENST00000380443 PDZD8Q8NEN9 1154 aa23.46■■□□□ 1.35
VPS16-201ENST00000380443 RANBP9Q96S59 729 aa23.46■■□□□ 1.35
VPS16-201ENST00000380443 RHOJQ9H4E5 214 aa23.46■■□□□ 1.35
VPS16-201ENST00000380443 IARS2Q9NSE4 1012 aaKnown RBP23.46■■□□□ 1.35
VPS16-201ENST00000380443 BACE2Q9Y5Z0 518 aa23.46■■□□□ 1.35
VPS16-201ENST00000380443 SLC12A8A0AV02 714 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 SIN3BO75182 1162 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 HAUS5O94927 633 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 PEX11BO96011 259 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 MT-CYBP00156 380 aaPredicted RBP23.45■■□□□ 1.34
VPS16-201ENST00000380443 MYL2P10916 166 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 TUFMP49411 452 aaKnown RBP23.45■■□□□ 1.34
VPS16-201ENST00000380443 MNX1P50219 401 aaPredicted RBP23.45■■□□□ 1.34
VPS16-201ENST00000380443 KCNJ2P63252 427 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 IL10RBQ08334 325 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 ILF2Q12905 390 aaKnown RBP23.45■■□□□ 1.34
VPS16-201ENST00000380443 PSMD5Q16401 504 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 MARC1Q5VT66 337 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 MBLAC2Q68D91 279 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 TTC9BQ8N6N2 239 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 IMP4Q96G21 291 aaKnown RBP23.45■■□□□ 1.34
VPS16-201ENST00000380443 AGAP2Q99490 1192 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 GPR22Q99680 433 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 HSFX1Q9UBD0 423 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 SLC27A5Q9Y2P5 690 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.45■■□□□ 1.34
VPS16-201ENST00000380443 H2AFYO75367 372 aaKnown RBP23.45■■□□□ 1.34
VPS16-201ENST00000380443 GATMP50440 423 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 RTP2Q5QGT7 225 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 RASIP1Q5U651 963 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 FBXL22Q6P050 247 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 CLEC14AQ86T13 490 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 DIS3LQ8TF46 1054 aaKnown RBP23.45■■□□□ 1.34
VPS16-201ENST00000380443 MRGPRX2Q96LB1 330 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 SP110Q9HB58 689 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 COPG2Q9UBF2 871 aa23.45■■□□□ 1.34
VPS16-201ENST00000380443 MKI67P46013 3256 aaKnown RBP23.45■■□□□ 1.34
VPS16-201ENST00000380443 DOCK4Q8N1I0 1966 aa23.44■■□□□ 1.34
VPS16-201ENST00000380443 SLC38A8A6NNN8 435 aa23.44■■□□□ 1.34
VPS16-201ENST00000380443 CHUKO15111 745 aa23.44■■□□□ 1.34
VPS16-201ENST00000380443 VNN2O95498 520 aa23.44■■□□□ 1.34
VPS16-201ENST00000380443 T-ENOLP0DO92 83 aa23.44■■□□□ 1.34
VPS16-201ENST00000380443 COL6A2P12110 1019 aa23.44■■□□□ 1.34
VPS16-201ENST00000380443 USP41Q3LFD5 358 aa23.44■■□□□ 1.34
VPS16-201ENST00000380443 C5orf22Q49AR2 442 aa23.44■■□□□ 1.34
VPS16-201ENST00000380443 SNX30Q5VWJ9 437 aa23.44■■□□□ 1.34
VPS16-201ENST00000380443 KIAA0930Q6ICG6 404 aaPredicted RBP23.44■■□□□ 1.34
VPS16-201ENST00000380443 SLC8B1Q6J4K2 584 aa23.44■■□□□ 1.34
VPS16-201ENST00000380443 KDELC1Q6UW63 502 aa23.44■■□□□ 1.34
VPS16-201ENST00000380443 WDR75Q8IWA0 830 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms