RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 EIF4A1P60842 406 aaKnown RBP8.84□□□□□ -0.99
LIG3-202ENST00000378526 BORAQ6PGQ7 559 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 PIGKQ92643 395 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 OSBP2Q969R2 916 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 FAM167AQ96KS9 214 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 LRRC40Q9H9A6 602 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 DOLKQ9UPQ8 538 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 F5H423 210 aaPredicted RBP8.84□□□□□ -0.99
LIG3-202ENST00000378526 M0R233 179 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 PRAMEF1O95521 474 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 HLA-DQA2P01906 255 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 BGNP21810 368 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 LHCGRP22888 699 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 TNFRSF8P28908 595 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 ALDH1B1P30837 517 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 LIFRP42702 1097 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 GCLMP48507 274 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 RPL26P61254 145 aaKnown RBP8.84□□□□□ -0.99
LIG3-202ENST00000378526 FAM189A2Q15884 450 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 WDR45BQ5MNZ6 344 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 RNF220Q5VTB9 566 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 CLYBLQ8N0X4 340 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 ZSCAN1Q8NBB4 408 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 POF1BQ8WVV4 589 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 FATE1Q969F0 183 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 DMRTB1Q96MA1 342 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 NEDD4P46934 1319 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 ETV5P41161 510 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 MSANTD2Q6P1R3 559 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 TDRPQ86YL5 185 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 ARMC10Q8N2F6 343 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 TMEM184CQ9NVA4 438 aa8.84□□□□□ -0.99
LIG3-202ENST00000378526 PLEKHG1Q9ULL1 1385 aa8.84□□□□□ -1
LIG3-202ENST00000378526 WASLO00401 505 aaPredicted RBP8.83□□□□□ -1
LIG3-202ENST00000378526 MAGEB2O15479 319 aa8.83□□□□□ -1
LIG3-202ENST00000378526 AP5Z1O43299 807 aa8.83□□□□□ -1
LIG3-202ENST00000378526 PRKCAP17252 672 aa8.83□□□□□ -1
LIG3-202ENST00000378526 BMP7P18075 431 aa8.83□□□□□ -1
LIG3-202ENST00000378526 UBA1P22314 1058 aaKnown RBP8.83□□□□□ -1
LIG3-202ENST00000378526 RBL1P28749 1068 aa8.83□□□□□ -1
LIG3-202ENST00000378526 SLC6A4P31645 630 aa8.83□□□□□ -1
LIG3-202ENST00000378526 COL28A1Q2UY09 1125 aa8.83□□□□□ -1
LIG3-202ENST00000378526 FOXP4Q8IVH2 680 aaPredicted RBP8.83□□□□□ -1
LIG3-202ENST00000378526 GJD3Q8N144 294 aa8.83□□□□□ -1
LIG3-202ENST00000378526 TPCN2Q8NHX9 752 aa8.83□□□□□ -1
LIG3-202ENST00000378526 RAD54LQ92698 747 aa8.83□□□□□ -1
LIG3-202ENST00000378526 RFKQ969G6 155 aa8.83□□□□□ -1
LIG3-202ENST00000378526 TRIM43Q96BQ3 446 aaPredicted RBP8.83□□□□□ -1
LIG3-202ENST00000378526 UCKL1Q9NWZ5 548 aa8.83□□□□□ -1
LIG3-202ENST00000378526 CCDC167Q9P0B6 97 aa8.83□□□□□ -1
LIG3-202ENST00000378526 IL18RAPO95256 599 aa8.83□□□□□ -1
LIG3-202ENST00000378526 ANGPTL1O95841 491 aa8.83□□□□□ -1
LIG3-202ENST00000378526 IFNGP01579 166 aa8.83□□□□□ -1
LIG3-202ENST00000378526 GALCP54803 685 aa8.83□□□□□ -1
LIG3-202ENST00000378526 SNRPFP62306 86 aaKnown RBP8.83□□□□□ -1
LIG3-202ENST00000378526 DYNLL1P63167 89 aaKnown RBP8.83□□□□□ -1
LIG3-202ENST00000378526 SKP1P63208 163 aa8.83□□□□□ -1
LIG3-202ENST00000378526 CERKLQ49MI3 558 aaPredicted RBP8.83□□□□□ -1
LIG3-202ENST00000378526 CCNYL2Q5T2Q4 361 aa8.83□□□□□ -1
LIG3-202ENST00000378526 CYP2R1Q6VVX0 501 aa8.83□□□□□ -1
LIG3-202ENST00000378526 MYO1HQ8N1T3 1032 aa8.83□□□□□ -1
LIG3-202ENST00000378526 PQLC1Q8N2U9 271 aa8.83□□□□□ -1
LIG3-202ENST00000378526 TRPM4Q8TD43 1214 aa8.83□□□□□ -1
LIG3-202ENST00000378526 CDC42EP4Q9H3Q1 356 aaKnown RBP8.83□□□□□ -1
LIG3-202ENST00000378526 ANKZF1Q9H8Y5 726 aa8.83□□□□□ -1
LIG3-202ENST00000378526 RAB21Q9UL25 225 aa8.83□□□□□ -1
LIG3-202ENST00000378526 CPSF4O95639 269 aaKnown RBP8.83□□□□□ -1
LIG3-202ENST00000378526 CACNB3P54284 484 aa8.83□□□□□ -1
LIG3-202ENST00000378526 CYP4F8P98187 520 aa8.83□□□□□ -1
LIG3-202ENST00000378526 TMEM53Q6P2H8 277 aa8.83□□□□□ -1
LIG3-202ENST00000378526 PIF1Q9H611 641 aa8.83□□□□□ -1
LIG3-202ENST00000378526 GDAQ9Y2T3 454 aa8.83□□□□□ -1
LIG3-202ENST00000378526 ABCA5Q8WWZ7 1642 aa8.83□□□□□ -1
LIG3-202ENST00000378526 DCXO43602 365 aa8.83□□□□□ -1
LIG3-202ENST00000378526 UGT2B4P06133 528 aa8.83□□□□□ -1
LIG3-202ENST00000378526 CSF1RP07333 972 aa8.83□□□□□ -1
LIG3-202ENST00000378526 IL1R1P14778 569 aa8.83□□□□□ -1
LIG3-202ENST00000378526 CHRNA5P30532 468 aa8.83□□□□□ -1
LIG3-202ENST00000378526 DLSTP36957 453 aa8.83□□□□□ -1
LIG3-202ENST00000378526 ACCSLQ4AC99 568 aa8.83□□□□□ -1
LIG3-202ENST00000378526 DNAJC14Q6Y2X3 702 aaPredicted RBP8.83□□□□□ -1
LIG3-202ENST00000378526 PTCHD4Q6ZW05 846 aa8.83□□□□□ -1
LIG3-202ENST00000378526 ZSWIM2Q8NEG5 633 aa8.83□□□□□ -1
LIG3-202ENST00000378526 OR7G2Q8NG99 324 aa8.83□□□□□ -1
LIG3-202ENST00000378526 OR52K1Q8NGK4 314 aa8.83□□□□□ -1
LIG3-202ENST00000378526 EDC3Q96F86 508 aaKnown RBP8.83□□□□□ -1
LIG3-202ENST00000378526 RPRD1AQ96P16 312 aaPredicted RBP8.83□□□□□ -1
LIG3-202ENST00000378526 COPS4Q9BT78 406 aa8.83□□□□□ -1
LIG3-202ENST00000378526 IFT80Q9P2H3 777 aaPredicted RBP8.83□□□□□ -1
LIG3-202ENST00000378526 VPS51Q9UID3 782 aa8.83□□□□□ -1
LIG3-202ENST00000378526 GNEQ9Y223 722 aaKnown RBP8.83□□□□□ -1
LIG3-202ENST00000378526 LEMD3Q9Y2U8 911 aa8.83□□□□□ -1
LIG3-202ENST00000378526 ACOT9Q9Y305 439 aa8.83□□□□□ -1
LIG3-202ENST00000378526 FABP12A6NFH5 140 aa8.83□□□□□ -1
LIG3-202ENST00000378526 CHURC1-FNTBB4DL54 471 aa8.83□□□□□ -1
LIG3-202ENST00000378526 DNAJA2O60884 412 aa8.83□□□□□ -1
LIG3-202ENST00000378526 FTH1P02794 183 aa8.83□□□□□ -1
LIG3-202ENST00000378526 HMGCRP04035 888 aa8.83□□□□□ -1
LIG3-202ENST00000378526 TMEM253P0C7T8 217 aa8.83□□□□□ -1
LIG3-202ENST00000378526 CYP2C8P10632 490 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms