RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 PPA2Q9H2U2 334 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 SNX7Q9UNH6 387 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 RAD54BQ9Y620 910 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 ARHGAP23Q9P227 1491 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 H3BMQ9 156 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 BTN3A1O00481 513 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 KATNA1O75449 491 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 SULT1C4O75897 302 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 PROS1P07225 676 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 ABHD2P08910 425 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 COMTP21964 271 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 SOX6P35712 828 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 ARSEP51690 589 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 PGDP52209 483 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 CD300CQ08708 224 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 DBPQ10586 325 aaPredicted RBP11.93□□□□□ -0.5
NPHP4-202ENST00000378161 DGKKQ5KSL6 1271 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 ZNF425Q6IV72 752 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 FBXL19Q6PCT2 694 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 LRP10Q7Z4F1 713 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 NSUN6Q8TEA1 469 aaKnown RBP11.93□□□□□ -0.5
NPHP4-202ENST00000378161 GIMAP5Q96F15 307 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 COG8Q96MW5 612 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 TARS2Q9BW92 718 aaKnown RBP11.93□□□□□ -0.5
NPHP4-202ENST00000378161 RPF2Q9H7B2 306 aaKnown RBP11.93□□□□□ -0.5
NPHP4-202ENST00000378161 SCN3BQ9NY72 215 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 KCND2Q9NZV8 630 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 KPNA5O15131 536 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 HOXC11O43248 304 aaPredicted RBP11.93□□□□□ -0.5
NPHP4-202ENST00000378161 SORBS3O60504 671 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 APOC1P02654 83 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 FASP25445 335 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 QARSP47897 775 aaKnown RBP11.93□□□□□ -0.5
NPHP4-202ENST00000378161 TMBIM6P55061 237 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 S100A12P80511 92 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 CLCA4Q14CN2 919 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 TAB1Q15750 504 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 CYP4A22Q5TCH4 519 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 RHPN2Q8IUC4 686 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 DDIASQ8IXT1 998 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 PPP1R2P1Q96PQ5 205 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 COQ10BQ9H8M1 238 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 OSGEPQ9NPF4 335 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 STARD7Q9NQZ5 370 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 CBY1Q9Y3M2 126 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 GJA3Q9Y6H8 435 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 MYH10P35580 1976 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 RBAK-RBAKDNI3L0D1 243 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 DCXO43602 365 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 GSTM1P09488 218 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 CACNB3P54284 484 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 MLLT6P55198 1093 aaPredicted RBP11.93□□□□□ -0.5
NPHP4-202ENST00000378161 SSTP61278 116 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 DYNLT1P63172 113 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 C1QBPQ07021 282 aaKnown RBP11.93□□□□□ -0.5
NPHP4-202ENST00000378161 SELENBP1Q13228 472 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 SNAPC2Q13487 334 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 C21orf62-AS1Q17RA5 79 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 PRELID2Q8N945 189 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 FBXL13Q8NEE6 735 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 MTERF3Q96E29 417 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 C1orf21Q9H246 121 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 NRBP2Q9NSY0 501 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 LRRC4BQ9NT99 713 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 TBC1D22BQ9NU19 505 aa11.93□□□□□ -0.5
NPHP4-202ENST00000378161 A8MV72 311 aaPredicted RBP11.92□□□□□ -0.5
NPHP4-202ENST00000378161 EPHB6O15197 1021 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 MYL4P12829 197 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 ATP6V1E1P36543 226 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 SLC26A2P50443 739 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 SLC13A2Q13183 592 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 CCDC85BQ15834 202 aaPredicted RBP11.92□□□□□ -0.5
NPHP4-202ENST00000378161 CGB2Q6NT52 195 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 ZNF571Q7Z3V5 609 aaPredicted RBP11.92□□□□□ -0.5
NPHP4-202ENST00000378161 ZNF677Q86XU0 584 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 RNF135Q8IUD6 432 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 TMEM126BQ8IUX1 230 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 ZHX1-C8orf76Q96EF9 292 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 APOPT1Q96IL0 206 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 GLT1D1Q96MS3 346 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 C11orf70Q9BRQ4 267 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 TRMT13Q9NUP7 481 aaKnown RBP11.92□□□□□ -0.5
NPHP4-202ENST00000378161 GRHL1Q9NZI5 618 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 CDY1Q9Y6F8 540 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 RIC1Q4ADV7 1423 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 SLC16A4O15374 487 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 KLRC4O43908 158 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 ECDO95905 644 aaPredicted RBP11.92□□□□□ -0.5
NPHP4-202ENST00000378161 KCNA5P22460 613 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 PSMA4P25789 261 aaKnown RBP11.92□□□□□ -0.5
NPHP4-202ENST00000378161 OPRL1P41146 370 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 GARSP41250 739 aaKnown RBP11.92□□□□□ -0.5
NPHP4-202ENST00000378161 JAK3P52333 1124 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 NDST2P52849 883 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 TBRG1Q3YBR2 411 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 SLX4IPQ5VYV7 408 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 BSPRYQ5W0U4 402 aa11.92□□□□□ -0.5
NPHP4-202ENST00000378161 TRIM72Q6ZMU5 477 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms