RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 MS4A2Q01362 244 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 PIGGQ5H8A4 983 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 LRRC43Q8N309 656 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 USP13Q92995 863 aaPredicted RBP16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 FERMT1Q9BQL6 677 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 LIN28AQ9H9Z2 209 aaKnown RBP16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 TCF7L2Q9NQB0 619 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 SETD4Q9NVD3 440 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 HEMK1Q9Y5R4 338 aaPredicted RBP16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 COL1A2P08123 1366 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 PAX3P23760 479 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 NDUFV1P49821 464 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 AGAP2Q99490 1192 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 GOLGA2P5Q9HBQ8 144 aa16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 RCOR3Q9P2K3 495 aaPredicted RBP16.88■□□□□ 0.29
PCDHA1-201ENST00000378133 M0QYT0 321 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 CLDN5O00501 218 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 ZNF24P17028 368 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 GLDCP23378 1020 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 EPHX2P34913 555 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 NAB1Q13506 487 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 GRTP1Q5TC63 336 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 OTUD1Q5VV17 481 aaPredicted RBP16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 SYPL2Q5VXT5 272 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 STRA8Q7Z7C7 330 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 ANKRD13AQ8IZ07 590 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 TMIGD2Q96BF3 282 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 ZNF669Q96BR6 464 aaPredicted RBP16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 CPNE1Q99829 537 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 SLC2A11Q9BYW1 496 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 BEST1O76090 585 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 FUT4P22083 530 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 GARSP41250 739 aaKnown RBP16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 DLG2Q15700 870 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 FSTL4Q6MZW2 842 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 ALKAL1Q6UXT8 129 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 NAPRTQ6XQN6 538 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 LPCAT2Q7L5N7 544 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 PPP1R36Q96LQ0 422 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 OSMRQ99650 979 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 CAB39LQ9H9S4 337 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 KLHL8Q9P2G9 620 aaPredicted RBP16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 TDRKHQ9Y2W6 561 aaKnown RBP16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 SH3GLB1Q9Y371 365 aa16.87■□□□□ 0.29
PCDHA1-201ENST00000378133 PRSS51A0A1B0GVH4 220 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 GLTPD2A6NH11 291 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 PIRO00625 290 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 ENO3P13929 434 aaPredicted RBP16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 ZNF23P17027 643 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 CDK9P50750 372 aaKnown RBP16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 CBX3Q13185 183 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 CEACAM7Q14002 265 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 SPANXN3Q5MJ09 141 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 TDRD5Q8NAT2 981 aaKnown RBP16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 RIN3Q8TB24 985 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 PDCD6IPQ8WUM4 868 aaKnown RBP16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 MOCOSQ96EN8 888 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 ADAMTS10Q9H324 1103 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 WDR55Q9H6Y2 383 aaPredicted RBP16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 NEMP1O14524 444 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 ME2P23368 584 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 PPP2R5DQ14738 602 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 NRF1Q16656 503 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 CCDC153Q494R4 210 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 POTEHQ6S545 545 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 BBS5Q8N3I7 341 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 DNAAF3Q8N9W5 541 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 APPL2Q8NEU8 664 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 RP9Q8TA86 221 aaKnown RBP16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 DLG3Q92796 817 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 EME1Q96AY2 570 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 RCN3Q96D15 328 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 RBBP8Q99708 897 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 ARHGEF38Q9NXL2 777 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 RRN3Q9NYV6 651 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 IGSF9Q9P2J2 1179 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 VPS28Q9UK41 221 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 UBQLN1Q9UMX0 589 aaKnown RBP16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 KCNH4Q9UQ05 1017 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 ZNF711Q9Y462 761 aa16.86■□□□□ 0.29
PCDHA1-201ENST00000378133 NUP205Q92621 2012 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 FAM72CH0Y354 149 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 EEF2KO00418 725 aaKnown RBP16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 XPO1O14980 1071 aaKnown RBP16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 SUPT3HO75486 399 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 IRF9Q00978 393 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 FAM72AQ5TYM5 149 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 FAM72DQ6L9T8 149 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 USP50Q70EL3 339 aaPredicted RBP16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 FAM72BQ86X60 149 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 CROCCP3Q8IVE0 287 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 RNF168Q8IYW5 571 aaPredicted RBP16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 ZBTB8BQ8NAP8 495 aaPredicted RBP16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 TSPAN18Q96SJ8 248 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 LRRC40Q9H9A6 602 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 ACSS2Q9NR19 701 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 PIGVQ9NUD9 493 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 SMIM28A0A1B0GU29 152 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 CAPNS1P04632 268 aa16.85■□□□□ 0.29
PCDHA1-201ENST00000378133 NOS2P35228 1153 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms