RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 NDNQ99608 321 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 CHST12Q9NRB3 414 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 FAM105AQ9NUU6 356 aa16.51■□□□□ 0.23
TRIM27-202ENST00000377199 AURKAO14965 403 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 MT-CO1P00395 513 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 LYNP07948 512 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 GABRB3P28472 473 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 PGFP49763 221 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 CDK7P50613 346 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 CDK18Q07002 472 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 ANO4Q32M45 955 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 SEL1L3Q68CR1 1132 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 OR52E8Q6IFG1 317 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 TMC7Q7Z402 723 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 BNIPLQ7Z465 357 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 CEP97Q8IW35 865 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 ATPAF2Q8N5M1 289 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 NXNL1Q96CM4 212 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 HDAC11Q96DB2 347 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 FSD1LQ9BXM9 530 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 TMLHEQ9NVH6 421 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 TTC24A2A3L6 582 aaPredicted RBP16.5■□□□□ 0.23
TRIM27-202ENST00000377199 MYADML2A6NDP7 307 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 ARL5CA6NH57 179 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 CCL22O00626 93 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 RNASEH1O60930 286 aaKnown RBP16.5■□□□□ 0.23
TRIM27-202ENST00000377199 FKBP6O75344 327 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 FBXO21O94952 628 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 MPOP05164 745 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 HNRNPLP14866 589 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRIM27-202ENST00000377199 GALNT2Q10471 571 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 XKR4Q5GH76 650 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 NAPEPLDQ6IQ20 393 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 ZC3HC1Q86WB0 502 aaKnown RBP16.5■□□□□ 0.23
TRIM27-202ENST00000377199 FAM156AQ8NDB6 213 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 OR6Y1Q8NGX8 325 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 ZSCAN18Q8TBC5 510 aaPredicted RBP16.5■□□□□ 0.23
TRIM27-202ENST00000377199 ELMO2Q96JJ3 720 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 SUDS3Q9H7L9 328 aaPredicted RBP16.5■□□□□ 0.23
TRIM27-202ENST00000377199 OXSMQ9NWU1 459 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 SF3B1O75533 1304 aaKnown RBP eCLIP16.5■□□□□ 0.235e-8■■■□□ 17.2
TRIM27-202ENST00000377199 M0QZ92 97 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 ITKQ08881 620 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 FOXB2Q5VYV0 432 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 CXCL17Q6UXB2 119 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 FBXW8Q8N3Y1 598 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 ACTRT2Q8TDY3 377 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 DQX1Q8TE96 717 aaKnown RBP16.5■□□□□ 0.23
TRIM27-202ENST00000377199 GATA6Q92908 595 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 NTAN1Q96AB6 310 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 RCN3Q96D15 328 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 TMA16Q96EY4 203 aaKnown RBP16.5■□□□□ 0.23
TRIM27-202ENST00000377199 SMARCD1Q96GM5 515 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 GBP5Q96PP8 586 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 CDRT15Q96T59 188 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 PARK7Q99497 189 aaKnown RBP16.5■□□□□ 0.23
TRIM27-202ENST00000377199 STN1Q9H668 368 aaKnown RBP16.5■□□□□ 0.23
TRIM27-202ENST00000377199 GTSE1Q9NYZ3 720 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 ADAM28Q9UKQ2 775 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 AK5Q9Y6K8 562 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 TTC3P53804 2025 aa16.5■□□□□ 0.23
TRIM27-202ENST00000377199 NCAM2O15394 837 aa16.49■□□□□ 0.23
TRIM27-202ENST00000377199 TFEBP19484 476 aa16.49■□□□□ 0.23
TRIM27-202ENST00000377199 PIK3R1P27986 724 aa16.49■□□□□ 0.23
TRIM27-202ENST00000377199 LRPAP1P30533 357 aa16.49■□□□□ 0.23
TRIM27-202ENST00000377199 LHX1P48742 406 aa16.49■□□□□ 0.23
TRIM27-202ENST00000377199 ADAM17P78536 824 aa16.49■□□□□ 0.23
TRIM27-202ENST00000377199 MRPS22P82650 360 aaKnown RBP16.49■□□□□ 0.23
TRIM27-202ENST00000377199 CMPK2Q5EBM0 449 aa16.49■□□□□ 0.23
TRIM27-202ENST00000377199 SDHAF4Q5VUM1 108 aa16.49■□□□□ 0.23
TRIM27-202ENST00000377199 ZNF470Q6ECI4 717 aa16.49■□□□□ 0.23
TRIM27-202ENST00000377199 LIMS2Q7Z4I7 341 aa16.49■□□□□ 0.23
TRIM27-202ENST00000377199 ZC3H15Q8WU90 426 aaKnown RBP16.49■□□□□ 0.23
TRIM27-202ENST00000377199 BUD23O43709 281 aaKnown RBP16.49■□□□□ 0.23
TRIM27-202ENST00000377199 OR4Q2P0C623 313 aa16.49■□□□□ 0.23
TRIM27-202ENST00000377199 SLC35E2BP0CK96 405 aa16.49■□□□□ 0.23
TRIM27-202ENST00000377199 RPL14P50914 215 aaKnown RBP16.49■□□□□ 0.23
TRIM27-202ENST00000377199 LBRQ14739 615 aaKnown RBP16.49■□□□□ 0.23
TRIM27-202ENST00000377199 DBN1Q16643 649 aa16.49■□□□□ 0.23
TRIM27-202ENST00000377199 TMCO4Q5TGY1 634 aa16.49■□□□□ 0.23
TRIM27-202ENST00000377199 GCNAQ96QF7 691 aa16.49■□□□□ 0.23
TRIM27-202ENST00000377199 SLC9A7Q96T83 725 aa16.49■□□□□ 0.23
TRIM27-202ENST00000377199 TRHDEQ9UKU6 1024 aa16.49■□□□□ 0.23
TRIM27-202ENST00000377199 NPY2RP49146 381 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 MAXP61244 160 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 DLG1Q12959 904 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 FAM110CQ1W6H9 321 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 TFAP2DQ7Z6R9 452 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 CLEC14AQ86T13 490 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 TBL1YQ9BQ87 522 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 FAM96AQ9H5X1 160 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 HTTP42858 3142 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 FAM95CA0A1B0GW59 222 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 CAPN8A6NHC0 703 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 CCNT2O60583 730 aaKnown RBP16.48■□□□□ 0.23
TRIM27-202ENST00000377199 ATP5BP06576 529 aaKnown RBP16.48■□□□□ 0.23
TRIM27-202ENST00000377199 SBK3P0C264 359 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 ZNF865P0CJ78 1059 aaPredicted RBP16.48■□□□□ 0.23
TRIM27-202ENST00000377199 TSPAN8P19075 237 aa16.48■□□□□ 0.23
TRIM27-202ENST00000377199 CPT1AP50416 773 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms