RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 SLC4A5Q9BY07 1137 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 SEMA6AQ9H2E6 1030 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 DPEP3Q9H4B8 488 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 COQ10BQ9H8M1 238 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 ZFYVE28Q9HCC9 887 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 SLC38A7Q9NVC3 462 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 SELENONQ9NZV5 590 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 IGSF9Q9P2J2 1179 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 PCDHGC3Q9UN70 934 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 HEY1Q9Y5J3 304 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 TMEM247A6NEH6 219 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 M0QYV0 167 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 PLOD2O00469 737 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 IGHA2P01877 340 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 AMHP03971 560 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 CTSHP09668 335 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 RPL10P27635 214 aaKnown RBP13.14□□□□□ -0.31
MSH5-204ENST00000375755 MAGEA3P43357 314 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 CDH6P55285 790 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 SOX4Q06945 474 aaPredicted RBP13.14□□□□□ -0.31
MSH5-204ENST00000375755 SMAD1Q15797 465 aaKnown RBP13.14□□□□□ -0.31
MSH5-204ENST00000375755 SH3PXD2AQ5TCZ1 1133 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 RCN3Q96D15 328 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 LRRC39Q96DD0 335 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 SNX27Q96L92 541 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 CDH19Q9H159 772 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 XPNPEP3Q9NQH7 507 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 FAM49BQ9NUQ9 324 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 USP18Q9UMW8 372 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 MYRFQ9Y2G1 1151 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 COQ6Q9Y2Z9 468 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 PCDHA11Q9Y5I1 949 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 SQORQ9Y6N5 450 aa13.14□□□□□ -0.31
MSH5-204ENST00000375755 FUOMA2VDF0 154 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 FBP2O00757 339 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 SPTLC1O15269 473 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 ADAM23O75077 832 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 GRAP2O75791 330 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 ENO3P13929 434 aaPredicted RBP13.13□□□□□ -0.31
MSH5-204ENST00000375755 ZNF24P17028 368 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 RXRGP48443 463 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 NUMBP49757 651 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 RGS7P49802 495 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 CPT1AP50416 773 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 GNASQ5JWF2 1037 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 UBXN11Q5T124 520 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 IL23RQ5VWK5 629 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 ACOT1Q86TX2 421 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 FAM156AQ8NDB6 213 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 ZSCAN18Q8TBC5 510 aaPredicted RBP13.13□□□□□ -0.31
MSH5-204ENST00000375755 ADAM32Q8TC27 787 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 ACMSDQ8TDX5 336 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 ISOC1Q96CN7 298 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 ZNF597Q96LX8 424 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 MOCS1Q9NZB8 636 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 RGSL1A5PLK6 1076 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 XPOTO43592 962 aaKnown RBP13.13□□□□□ -0.31
MSH5-204ENST00000375755 BCAS2O75934 225 aaPredicted RBP13.13□□□□□ -0.31
MSH5-204ENST00000375755 MAGEA6P43360 314 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 RBP5P82980 135 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 NAPRTQ6XQN6 538 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 C7orf31Q8N865 590 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 FNIP1Q8TF40 1166 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 ATP6V1E2Q96A05 226 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 C12orf43Q96C57 262 aaKnown RBP13.13□□□□□ -0.31
MSH5-204ENST00000375755 PPP1R36Q96LQ0 422 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 FERMT1Q9BQL6 677 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 PAIP1Q9H074 479 aaKnown RBP13.13□□□□□ -0.31
MSH5-204ENST00000375755 WDR55Q9H6Y2 383 aaPredicted RBP13.13□□□□□ -0.31
MSH5-204ENST00000375755 ANLNQ9NQW6 1124 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.13□□□□□ -0.31
MSH5-204ENST00000375755 VPS28Q9UK41 221 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 CNOT11Q9UKZ1 510 aaKnown RBP13.13□□□□□ -0.31
MSH5-204ENST00000375755 PCDHB12Q9Y5F1 795 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 NR2E3Q9Y5X4 410 aa13.13□□□□□ -0.31
MSH5-204ENST00000375755 C17orf102A2RUQ5 167 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 ACOT8O14734 319 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 AOC2O75106 756 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 METTL18O95568 372 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 FUCA1P04066 466 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 TCN1P20061 433 aaPredicted RBP13.12□□□□□ -0.31
MSH5-204ENST00000375755 FGFR3P22607 806 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 ME2P23368 584 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 CNTFP26441 200 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 FLT3LGP49771 235 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 IKBKEQ14164 716 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 PPP1R26Q5T8A7 1209 aaPredicted RBP13.12□□□□□ -0.31
MSH5-204ENST00000375755 NOTUMQ6P988 496 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 PTAR1Q7Z6K3 402 aaPredicted RBP13.12□□□□□ -0.31
MSH5-204ENST00000375755 GPR180Q86V85 440 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 XYLT1Q86Y38 959 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 MYO1HQ8N1T3 1032 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 DLG3Q92796 817 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 RTP4Q96DX8 246 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 RMND5BQ96G75 393 aaPredicted RBP13.12□□□□□ -0.31
MSH5-204ENST00000375755 ZFP42Q96MM3 310 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 TMEM79Q9BSE2 394 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 TCF7L2Q9NQB0 619 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 TBC1D23Q9NUY8 699 aa13.12□□□□□ -0.31
MSH5-204ENST00000375755 DCDC2Q9UHG0 476 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms