RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 MRPS7Q9Y2R9 242 aaKnown RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 KCNIP3Q9Y2W7 256 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 A0A087WWV3 80 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 UBXN8O00124 270 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 ARHGEF15O94989 841 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 ZNF14P17017 642 aaPredicted RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 ITGA6P23229 1130 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 ETV5P41161 510 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 RPS7P62081 194 aaKnown RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 FSCN1Q16658 493 aaKnown RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 C1orf94Q6P1W5 598 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 CORO6Q6QEF8 472 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 TSPAN33Q86UF1 283 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 HERC6Q8IVU3 1022 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 DSELQ8IZU8 1212 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 SPATA5L1Q9BVQ7 753 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 KRT33AO76009 404 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 PSKH1P11801 424 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 NUDT1P36639 197 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 CBX5P45973 191 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 FMO5P49326 533 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 JAK3P52333 1124 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 CDKAL1Q5VV42 579 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 USPL1Q5W0Q7 1092 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 ZNF772Q68DY9 489 aaPredicted RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 PDZD9Q8IXQ8 264 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 WDSUB1Q8N9V3 476 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 ARMCX1Q9P291 453 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 NOD1Q9Y239 953 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 ZNF99A8MXY4 864 aaPredicted RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 FPGTO14772 594 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 PAPSS1O43252 624 aaPredicted RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 RBP3P10745 1247 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 LBPP18428 481 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 ABRQ12979 859 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 SHROOM1Q2M3G4 852 aaPredicted RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 PGM2L1Q6PCE3 622 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 SNX18Q96RF0 628 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 FLT1P17948 1338 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 SPTLC1O15269 473 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 SLC2A5P22732 501 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 GNA15P30679 374 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 GRIA3P42263 894 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 ARF5P84085 180 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 LAPTM4BQ86VI4 370 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 TMC2Q8TDI7 906 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 UTP15Q8TED0 518 aaKnown RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 LACRTQ9GZZ8 138 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 INTS10Q9NVR2 710 aaKnown RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 PAICSP22234 425 aaKnown RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 ACSL1P33121 698 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 COTL1Q14019 142 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 SIRT2Q8IXJ6 389 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 DEDD2Q8WXF8 326 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 FAM120BQ96EK7 910 aaKnown RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 KAT8Q9H7Z6 458 aaKnown RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 COPZ2Q9P299 210 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 CAPN8A6NHC0 703 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 AP5Z1O43299 807 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 NDUFB5O43674 189 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 TRIM3O75382 744 aaPredicted RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 CSDE1O75534 798 aaKnown RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 RPLP0P05388 317 aaKnown RBP6.7□□□□□ -1.34
UBR4-204ENST00000375254 LCN1P31025 176 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 COASYQ13057 564 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 LRRC24Q50LG9 513 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 ZNF425Q6IV72 752 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 C6orf89Q6UWU4 347 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 SDR16C5Q8N3Y7 309 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 ATXN3LQ9H3M9 355 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 DNAJC28Q9NX36 388 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 TAS2R3Q9NYW6 316 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 CA5BQ9Y2D0 317 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 TRPV2Q9Y5S1 764 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 KRBOX1C9JBD0 128 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 SLC28A2O43868 658 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 RFPL1O75677 317 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 MATN1P21941 496 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 SLC6A4P31645 630 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 PSMC5P62195 406 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 FIG4Q92562 907 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 GPRC5DQ9NZD1 345 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 NR2E3Q9Y5X4 410 aa6.7□□□□□ -1.34
UBR4-204ENST00000375254 H3BSA7 217 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 SUPT7LO94864 414 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 ADAP00813 363 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 CDKN2CP42773 168 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 ERVK-9P63128 1117 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 SELPLGQ14242 412 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 DUPD1Q68J44 220 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 JPH1Q9HDC5 661 aaPredicted RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 GFOD1Q9NXC2 390 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 GRHL1Q9NZI5 618 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 PER2O15055 1255 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 SGTAO43765 313 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 ITGAVP06756 1048 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 CYP3A4P08684 503 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 RAB3AP20336 220 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 C1QBPQ07021 282 aaKnown RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 FITM2Q8N6M3 262 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms