RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 CBX2Q14781 532 aaPredicted RBP15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 ZNF77Q15935 545 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 DNAJC21Q5F1R6 531 aaKnown RBP15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 AGBL2Q5U5Z8 902 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 MARC1Q5VT66 337 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 RNF219Q5W0B1 726 aaPredicted RBP15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 DENND5AQ6IQ26 1287 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 KDELC1Q6UW63 502 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 TDRD5Q8NAT2 981 aaKnown RBP15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 ING5Q8WYH8 240 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 SMG7Q92540 1137 aaKnown RBP15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 PGM2Q96G03 612 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 IMP4Q96G21 291 aaKnown RBP15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 LRRC3BQ96PB8 259 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 SLC25A51Q9H1U9 297 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 NT5MQ9NPB1 228 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 TDP1Q9NUW8 608 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 TCRBV9S1A1TA0A576 114 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 TTC24A2A3L6 582 aaPredicted RBP15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 SMIM23A6NLE4 172 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 SARNPP82979 210 aaKnown RBP15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 ARF5P84085 180 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 USP4Q13107 963 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 EFTUD2Q15029 972 aaKnown RBP eCLIP15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 ARHGAP15Q53QZ3 475 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 TMCO4Q5TGY1 634 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 FYB2Q5VWT5 728 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 UNC5AQ6ZN44 842 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 PALM2Q8IXS6 379 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 TDHQ8IZJ6 230 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 CARNMT1Q8N4J0 409 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 FBF1Q8TES7 1133 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 BHMTQ93088 406 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 MRPL38Q96DV4 380 aaKnown RBP15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 LMLNQ96KR4 655 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 MRGPRX2Q96LB1 330 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 NSMCE3Q96MG7 304 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 ZNF599Q96NL3 588 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 APOL2Q9BQE5 337 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 ACSS3Q9H6R3 686 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 SYBUQ9NX95 663 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 VPS18Q9P253 973 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 CDH22Q9UJ99 828 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 TTLL3Q9Y4R7 772 aa15.97■□□□□ 0.15
NIPAL3-204ENST00000374399 MIA3Q5JRA6 1907 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 TLDC2A0PJX2 215 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 TCF3P15923 654 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 ETFBP38117 255 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 SESN2P58004 480 aaPredicted RBP15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 DSC2Q02487 901 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 MPP7Q5T2T1 576 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 STEAP4Q687X5 459 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 IL31Q6EBC2 164 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 ZNF783Q6ZMS7 281 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 ZNF354CQ86Y25 554 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 ARID3BQ8IVW6 561 aaPredicted RBP15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 CYP4X1Q8N118 509 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 GOLGA6L1Q8N7Z2 621 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 TIFAQ96CG3 184 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 RSPRY1Q96DX4 576 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 XPO6Q96QU8 1125 aaKnown RBP15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 FEM1AQ9BSK4 669 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 DHRS4Q9BTZ2 278 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 SPON2Q9BUD6 331 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 PRO3102Q9H379 93 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 CENPHQ9H3R5 247 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 LRRC40Q9H9A6 602 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 ATP13A1Q9HD20 1204 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 PLK2Q9NYY3 685 aa15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 ZC3H7BQ9UGR2 993 aaKnown RBP15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 MRPS23Q9Y3D9 190 aaKnown RBP15.96■□□□□ 0.15
NIPAL3-204ENST00000374399 GOLGA6CA6NDK9 693 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 SDR42E2A6NKP2 422 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 HMGB1P1B2RPK0 211 aaPredicted RBP15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 ZNF197O14709 1029 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 LINC01565O15544 149 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 SNAP91O60641 907 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 AGTP01019 485 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 GOLGA6DP0CG33 693 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 CSKP41240 450 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 HYAL1Q12794 435 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 PRPSAP1Q14558 356 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 MPPE1Q53F39 396 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 ALG1LQ6GMV1 187 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 TPGS1Q6ZTW0 290 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 CFAP36Q96G28 342 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 LINC00597Q9H2U6 94 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 SFXN1Q9H9B4 322 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 SMYD2Q9NRG4 433 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 GOLGA6AQ9NYA3 693 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 LGALS13Q9UHV8 139 aa15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 NOVA2Q9UNW9 492 aaKnown RBP15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 AAR2Q9Y312 384 aaKnown RBP15.95■□□□□ 0.14
NIPAL3-204ENST00000374399 BPTFQ12830 3046 aa15.94■□□□□ 0.14
NIPAL3-204ENST00000374399 GOLGA6L10A6NI86 522 aa15.94■□□□□ 0.14
NIPAL3-204ENST00000374399 FOXO6A8MYZ6 492 aa15.94■□□□□ 0.14
NIPAL3-204ENST00000374399 H0Y626 953 aa15.94■□□□□ 0.14
NIPAL3-204ENST00000374399 RRP9O43818 475 aaKnown RBP15.94■□□□□ 0.14
NIPAL3-204ENST00000374399 ANXA9O76027 345 aa15.94■□□□□ 0.14
NIPAL3-204ENST00000374399 RGRP47804 291 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms