RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 TRPM5Q9NZQ8 1165 aa14.59□□□□□ -0.07
HMGA1-203ENST00000374116 ZNF197O14709 1029 aa14.58□□□□□ -0.08
HMGA1-203ENST00000374116 UNC5CO95185 931 aa14.58□□□□□ -0.08
HMGA1-203ENST00000374116 ZFXP17010 805 aaPredicted RBP14.58□□□□□ -0.08
HMGA1-203ENST00000374116 SSTR1P30872 391 aa14.58□□□□□ -0.08
HMGA1-203ENST00000374116 L1CAMP32004 1257 aa14.58□□□□□ -0.08
HMGA1-203ENST00000374116 MATKP42679 507 aa14.58□□□□□ -0.08
HMGA1-203ENST00000374116 YWHAGP61981 247 aaKnown RBP eCLIP14.58□□□□□ -0.08
HMGA1-203ENST00000374116 MRPS5P82675 430 aaKnown RBP14.58□□□□□ -0.08
HMGA1-203ENST00000374116 KLC1Q07866 573 aa14.58□□□□□ -0.08
HMGA1-203ENST00000374116 PM20D1Q6GTS8 502 aa14.58□□□□□ -0.08
HMGA1-203ENST00000374116 ADGRD1Q6QNK2 874 aa14.58□□□□□ -0.08
HMGA1-203ENST00000374116 SPATA21Q7Z572 469 aa14.58□□□□□ -0.08
HMGA1-203ENST00000374116 AGGF1Q8N302 714 aaeCLIP14.58□□□□□ -0.08
HMGA1-203ENST00000374116 B4GALNT2Q8NHY0 566 aa14.58□□□□□ -0.08
HMGA1-203ENST00000374116 MRPS31Q92665 395 aaKnown RBP14.58□□□□□ -0.08
HMGA1-203ENST00000374116 NECTIN4Q96NY8 510 aa14.58□□□□□ -0.08
HMGA1-203ENST00000374116 NECAB3Q96P71 396 aaPredicted RBP14.58□□□□□ -0.08
HMGA1-203ENST00000374116 GCNAQ96QF7 691 aa14.58□□□□□ -0.08
HMGA1-203ENST00000374116 FAM167BQ9BTA0 163 aa14.58□□□□□ -0.08
HMGA1-203ENST00000374116 GPATCH2LQ9NWQ4 482 aa14.58□□□□□ -0.08
HMGA1-203ENST00000374116 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.58□□□□□ -0.08
HMGA1-203ENST00000374116 CCL26Q9Y258 94 aa14.58□□□□□ -0.08
HMGA1-203ENST00000374116 A8MUI8 341 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 KCNN4O15554 427 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 PEX11AO75192 247 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 SPAG6O75602 509 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 ASMTLO95671 621 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 VIPR2P41587 438 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 ATXN1P54253 815 aaKnown RBP14.57□□□□□ -0.08
HMGA1-203ENST00000374116 WDR4P57081 412 aaKnown RBP14.57□□□□□ -0.08
HMGA1-203ENST00000374116 SPARCL1Q14515 664 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 TSNAXIP1Q2TAA8 658 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 SPDYAQ5MJ70 313 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 OTUD1Q5VV17 481 aaPredicted RBP14.57□□□□□ -0.08
HMGA1-203ENST00000374116 BSPRYQ5W0U4 402 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 ZSCAN18Q8TBC5 510 aaPredicted RBP14.57□□□□□ -0.08
HMGA1-203ENST00000374116 FAM81AQ8TBF8 368 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 CEP295NLQ96MC4 621 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 ASB2Q96Q27 587 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 EPAS1Q99814 870 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 WDR83Q9BRX9 315 aaKnown RBP14.57□□□□□ -0.08
HMGA1-203ENST00000374116 RPP25Q9BUL9 199 aaKnown RBP14.57□□□□□ -0.08
HMGA1-203ENST00000374116 PHF7Q9BWX1 381 aaPredicted RBP14.57□□□□□ -0.08
HMGA1-203ENST00000374116 VCXQ9H320 206 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 CNGB3Q9NQW8 809 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 TLR8Q9NR97 1041 aaKnown RBP14.57□□□□□ -0.08
HMGA1-203ENST00000374116 TXLNGQ9NUQ3 528 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 SMPD4Q9NXE4 827 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 MYO10Q9HD67 2058 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 COCHO43405 550 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 COQ9O75208 318 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 SPAG7O75391 227 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 DAB1O75553 588 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 PRAMEF12O95522 483 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 ZDHHC11BP0C7U3 371 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 TPBGLP0DKB5 382 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 LAMP2P13473 410 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 BMP1P13497 986 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 TAC1P20366 129 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 ZXDBP98169 803 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 SLC25A52Q3SY17 297 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 FAM78AQ5JUQ0 283 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 WASHC2DQ5SRD0 308 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 RGS9BPQ6ZS82 235 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 MON1AQ86VX9 555 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 CDKL3Q8IVW4 592 aaPredicted RBP14.57□□□□□ -0.08
HMGA1-203ENST00000374116 ARID3BQ8IVW6 561 aaPredicted RBP14.57□□□□□ -0.08
HMGA1-203ENST00000374116 TAB3Q8N5C8 712 aaPredicted RBP14.57□□□□□ -0.08
HMGA1-203ENST00000374116 LEMD2Q8NC56 503 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 ADAM32Q8TC27 787 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 INPP5DQ92835 1189 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 FAM136AQ96C01 138 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 SLC2A13Q96QE2 648 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 CYTH2Q99418 400 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 PAFAH2Q99487 392 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 CHCHD3Q9NX63 227 aaKnown RBP14.57□□□□□ -0.08
HMGA1-203ENST00000374116 LIMD1Q9UGP4 676 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 SFMBT1Q9UHJ3 866 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 CDH7Q9ULB5 785 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 HEY1Q9Y5J3 304 aa14.57□□□□□ -0.08
HMGA1-203ENST00000374116 TRIOO75962 3097 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 TLR5O60602 858 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 LTFP02788 710 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 FYNP06241 537 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 CKMP06732 381 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 ASGR2P07307 311 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 IMPDH2P12268 514 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 HDCP19113 662 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 ELK3P41970 407 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 MAGEA6P43360 314 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 NR2C2P49116 596 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 PITX1P78337 314 aaPredicted RBP14.56□□□□□ -0.08
HMGA1-203ENST00000374116 ARHGAP15Q53QZ3 475 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 PPP6R3Q5H9R7 873 aaPredicted RBP14.56□□□□□ -0.08
HMGA1-203ENST00000374116 C10orf120Q5SQS8 335 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 SYPL2Q5VXT5 272 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 BTBD8Q5XKL5 378 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 PARM1Q6UWI2 310 aa14.56□□□□□ -0.08
HMGA1-203ENST00000374116 MIB1Q86YT6 1006 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms