RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 ARF5P84085 180 aa18.71■□□□□ 0.59
PBX3-205ENST00000373492 CAMK2GQ13555 558 aaPredicted RBP18.71■□□□□ 0.59
PBX3-205ENST00000373492 DLG2Q15700 870 aa18.71■□□□□ 0.59
PBX3-205ENST00000373492 HNRNPA1L2Q32P51 320 aaKnown RBP18.71■□□□□ 0.59
PBX3-205ENST00000373492 AFMIDQ63HM1 303 aa18.71■□□□□ 0.59
PBX3-205ENST00000373492 LINGO4Q6UY18 593 aa18.71■□□□□ 0.59
PBX3-205ENST00000373492 CCDC50Q8IVM0 306 aa18.71■□□□□ 0.59
PBX3-205ENST00000373492 DCLK2Q8N568 766 aa18.71■□□□□ 0.59
PBX3-205ENST00000373492 NPWQ8N729 165 aa18.71■□□□□ 0.59
PBX3-205ENST00000373492 UBL4BQ8N7F7 174 aa18.71■□□□□ 0.59
PBX3-205ENST00000373492 EXD1Q8NHP7 514 aa18.71■□□□□ 0.59
PBX3-205ENST00000373492 PCDH19Q8TAB3 1148 aa18.71■□□□□ 0.59
PBX3-205ENST00000373492 RLN3Q8WXF3 142 aa18.71■□□□□ 0.59
PBX3-205ENST00000373492 ERLEC1Q96DZ1 483 aa18.71■□□□□ 0.59
PBX3-205ENST00000373492 CCDC114Q96M63 670 aa18.71■□□□□ 0.59
PBX3-205ENST00000373492 RNF157Q96PX1 679 aa18.71■□□□□ 0.59
PBX3-205ENST00000373492 KLC2Q9H0B6 622 aa18.71■□□□□ 0.59
PBX3-205ENST00000373492 PCDHGA5Q9Y5G8 931 aa18.71■□□□□ 0.59
PBX3-205ENST00000373492 C3orf70A6NLC5 250 aaPredicted RBP18.7■□□□□ 0.58
PBX3-205ENST00000373492 EPN2O95208 641 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 ZFXP17010 805 aaPredicted RBP18.7■□□□□ 0.58
PBX3-205ENST00000373492 CETN2P41208 172 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 PAPOLAP51003 745 aaKnown RBP18.7■□□□□ 0.58
PBX3-205ENST00000373492 COPAP53621 1224 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 RWDD2BP57060 319 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 PAFAH1B3Q15102 231 aaKnown RBP18.7■□□□□ 0.58
PBX3-205ENST00000373492 SPDYCQ5MJ68 293 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 PMS2CLQ68D20 193 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 NCBP2-AS2Q69YL0 99 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 SLC36A4Q6YBV0 504 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 RFX6Q8HWS3 928 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 TMPRSS6Q8IU80 811 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 ARHGAP12Q8IWW6 846 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 OR2T3Q8NH03 318 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 CASKIN2Q8WXE0 1202 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 KRT35Q92764 455 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 MKRN2Q9H000 416 aaKnown RBP18.7■□□□□ 0.58
PBX3-205ENST00000373492 SP110Q9HB58 689 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 PRSS16Q9NQE7 514 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 MFHAS1Q9Y4C4 1052 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 FARP1Q9Y4F1 1045 aaPredicted RBP18.7■□□□□ 0.58
PBX3-205ENST00000373492 ZNF292O60281 2723 aa18.7■□□□□ 0.58
PBX3-205ENST00000373492 WDR87Q6ZQQ6 2873 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 APOL1O14791 398 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 MAP3K13O43283 966 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 RNASEH1O60930 286 aaKnown RBP18.69■□□□□ 0.58
PBX3-205ENST00000373492 FTCDO95954 541 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 MT-CO1P00395 513 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 BCKDHBP21953 392 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 RECQLP46063 649 aaPredicted RBP18.69■□□□□ 0.58
PBX3-205ENST00000373492 MARCKSL1P49006 195 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 COPS2P61201 443 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 TFDP2Q14188 446 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 TFDP3Q5H9I0 405 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 C22orf39Q6P5X5 142 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 MFSD7Q6UXD7 560 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 KIAA1324Q6UXG2 1013 aaKnown RBP18.69■□□□□ 0.58
PBX3-205ENST00000373492 SPOCD1Q6ZMY3 1216 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 LRRC49Q8IUZ0 686 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 FRS2Q8WU20 508 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 PRCCQ92733 491 aaPredicted RBP18.69■□□□□ 0.58
PBX3-205ENST00000373492 PTPRN2Q92932 1015 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 SIPA1Q96FS4 1042 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 CEP44Q9C0F1 390 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 MBD1Q9UIS9 605 aaPredicted RBP18.69■□□□□ 0.58
PBX3-205ENST00000373492 SDK1Q7Z5N4 2213 aa18.69■□□□□ 0.58
PBX3-205ENST00000373492 FRYLO94915 3013 aa18.68■□□□□ 0.58
PBX3-205ENST00000373492 MFSD11O43934 449 aa18.68■□□□□ 0.58
PBX3-205ENST00000373492 SIN3BO75182 1162 aa18.68■□□□□ 0.58
PBX3-205ENST00000373492 TGM1P22735 817 aa18.68■□□□□ 0.58
PBX3-205ENST00000373492 CDKN2BP42772 138 aa18.68■□□□□ 0.58
PBX3-205ENST00000373492 IL10RBQ08334 325 aa18.68■□□□□ 0.58
PBX3-205ENST00000373492 INO80DQ53TQ3 878 aaPredicted RBP18.68■□□□□ 0.58
PBX3-205ENST00000373492 C9orf64Q5T6V5 341 aa18.68■□□□□ 0.58
PBX3-205ENST00000373492 LPCAT2Q7L5N7 544 aa18.68■□□□□ 0.58
PBX3-205ENST00000373492 ATPAF2Q8N5M1 289 aa18.68■□□□□ 0.58
PBX3-205ENST00000373492 PCDH20Q8N6Y1 951 aaKnown RBP18.68■□□□□ 0.58
PBX3-205ENST00000373492 PQLC3Q8N755 202 aa18.68■□□□□ 0.58
PBX3-205ENST00000373492 NETO2Q8NC67 525 aa18.68■□□□□ 0.58
PBX3-205ENST00000373492 TRIM58Q8NG06 486 aa18.68■□□□□ 0.58
PBX3-205ENST00000373492 SLC6A17Q9H1V8 727 aa18.68■□□□□ 0.58
PBX3-205ENST00000373492 MTG2Q9H4K7 406 aa18.68■□□□□ 0.58
PBX3-205ENST00000373492 ITM2CQ9NQX7 267 aa18.68■□□□□ 0.58
PBX3-205ENST00000373492 USP36Q9P275 1121 aaKnown RBP18.68■□□□□ 0.58
PBX3-205ENST00000373492 UBA2Q9UBT2 640 aaPredicted RBP18.68■□□□□ 0.58
PBX3-205ENST00000373492 IPO11Q9UI26 975 aaKnown RBP18.68■□□□□ 0.58
PBX3-205ENST00000373492 ABCA7Q8IZY2 2146 aa18.67■□□□□ 0.58
PBX3-205ENST00000373492 IGHV1OR15-9A0A0B4J2B8 117 aa18.67■□□□□ 0.58
PBX3-205ENST00000373492 K7ERQ8 282 aa18.67■□□□□ 0.58
PBX3-205ENST00000373492 SMAD6O43541 496 aaKnown RBP18.67■□□□□ 0.58
PBX3-205ENST00000373492 BNIP3LO60238 219 aa18.67■□□□□ 0.58
PBX3-205ENST00000373492 FOXD2O60548 495 aaPredicted RBP18.67■□□□□ 0.58
PBX3-205ENST00000373492 PRAMEF11O60813 436 aa18.67■□□□□ 0.58
PBX3-205ENST00000373492 ACADMP11310 421 aa18.67■□□□□ 0.58
PBX3-205ENST00000373492 MX2P20592 715 aa18.67■□□□□ 0.58
PBX3-205ENST00000373492 PEX5P50542 639 aa18.67■□□□□ 0.58
PBX3-205ENST00000373492 ZBTB16Q05516 673 aa18.67■□□□□ 0.58
PBX3-205ENST00000373492 SPEM2Q0P670 501 aa18.67■□□□□ 0.58
PBX3-205ENST00000373492 ELAVL3Q14576 367 aaKnown RBP18.67■□□□□ 0.58
PBX3-205ENST00000373492 CSRP2Q16527 193 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms