RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 PTPN7P35236 360 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 RTP1P59025 263 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 ZNF772Q68DY9 489 aaPredicted RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 NXF1Q9UBU9 619 aaKnown RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 RNF112Q9ULX5 631 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 CLEC4AQ9UMR7 237 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 HARS2P49590 506 aaKnown RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 CCNG2Q16589 344 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 HIST2H2ACQ16777 129 aaPredicted RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 HIST2H2AA3Q6FI13 130 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 SCARA5Q6ZMJ2 495 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 PID1Q7Z2X4 250 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 NSUN6Q8TEA1 469 aaKnown RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 MAU2Q9Y6X3 613 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 IFNA10P01566 189 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 IFNA4P05014 189 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 ITGAVP06756 1048 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 PAEPP09466 180 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 GSTT2P0CG29 244 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 SLC16A2P36021 539 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 SPOUT1Q5T280 376 aaKnown RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 KLHDC10Q6PID8 442 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 MFSD2AQ8NA29 543 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 MAGEB10Q96LZ2 347 aaPredicted RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 MED15Q96RN5 788 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 PLEKHF1Q96S99 279 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 RIT2Q99578 217 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 PZPP20742 1482 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 SOAT1P35610 550 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 HALP42357 657 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 CBFBQ13951 182 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 GPR158Q5T848 1215 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 ZNF425Q6IV72 752 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 PHACTR4Q8IZ21 702 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 OR14K1Q8NGZ2 314 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 METTL6Q8TCB7 284 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 PPP1R16BQ96T49 567 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 LRRC40Q9H9A6 602 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 GJB4Q9NTQ9 266 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 PADI4Q9UM07 663 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 ANXA5P08758 320 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 RARBP10826 455 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 FGFR3P22607 806 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 SEMA3AQ14563 771 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 ZNF548Q8NEK5 533 aaPredicted RBP7.11□□□□□ -1.27
CSMD2-206ENST00000373388 TCP10LQ8TDR4 215 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 WWOXQ9NZC7 414 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 TCP10L2B9ZVM9 353 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 KCNH1O95259 989 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 RBP3P10745 1247 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 RALAP11233 206 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 CCNG1P51959 295 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 CBLBQ13191 982 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 KCTD1Q719H9 257 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 TRMT2AQ8IZ69 625 aaKnown RBP7.11□□□□□ -1.27
CSMD2-206ENST00000373388 TFB1MQ8WVM0 346 aaKnown RBP7.11□□□□□ -1.27
CSMD2-206ENST00000373388 FAM20AQ96MK3 541 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 GFM1Q96RP9 751 aaKnown RBP7.11□□□□□ -1.27
CSMD2-206ENST00000373388 C7orf25Q9BPX7 421 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 OXCT2Q9BYC2 517 aaPredicted RBP7.11□□□□□ -1.27
CSMD2-206ENST00000373388 KAT8Q9H7Z6 458 aaKnown RBP7.11□□□□□ -1.27
CSMD2-206ENST00000373388 NAGPAQ9UK23 515 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 RAB4BP61018 213 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 RPP38P78345 283 aaKnown RBP7.11□□□□□ -1.27
CSMD2-206ENST00000373388 ZNF181Q2M3W8 571 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 ZNF549Q6P9A3 640 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 ZNF662Q6ZS27 426 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 CLNKQ7Z7G1 428 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 HPS6Q86YV9 775 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 LARGE2Q8N3Y3 721 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 PIH1D2Q8WWB5 315 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 C7orf26Q96N11 449 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 GAL3ST1Q99999 423 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 SIK2Q9H0K1 926 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 STK32BQ9NY57 414 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 DISC1C4P0D8 188 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 RPLP0P05388 317 aaKnown RBP7.11□□□□□ -1.27
CSMD2-206ENST00000373388 MNDAP41218 407 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 DRG2P55039 364 aaKnown RBP7.11□□□□□ -1.27
CSMD2-206ENST00000373388 ZNF45Q02386 682 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 FUT11Q495W5 492 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 FAM13CQ8NE31 585 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 TSNAXQ99598 290 aaKnown RBP7.11□□□□□ -1.27
CSMD2-206ENST00000373388 AKAP6Q13023 2319 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 MGAT4DA6NG13 374 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 SLC30A4O14863 429 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 DDX3YO15523 660 aaKnown RBP7.11□□□□□ -1.27
CSMD2-206ENST00000373388 PMPCBO75439 489 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 UGT2B4P06133 528 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 ZNF37AP17032 561 aaPredicted RBP7.11□□□□□ -1.27
CSMD2-206ENST00000373388 GCLMP48507 274 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 NFIAQ12857 509 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 HES5Q5TA89 166 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 N4BP2L1Q5TBK1 243 aaPredicted RBP7.11□□□□□ -1.27
CSMD2-206ENST00000373388 LRRC71Q8N4P6 559 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 SENP6Q9GZR1 1112 aaPredicted RBP7.11□□□□□ -1.27
CSMD2-206ENST00000373388 ACSL5Q9ULC5 683 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 CAMSAP1Q5T5Y3 1602 aa7.11□□□□□ -1.27
CSMD2-206ENST00000373388 NUP153P49790 1475 aaKnown RBP7.11□□□□□ -1.27
CSMD2-206ENST00000373388 RRN3P2A6NIE6 340 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms