RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 CYP2F1P24903 491 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 UGT1A3P35503 534 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 UGT1A5P35504 534 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 HALP42357 657 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 NKX2-5P52952 324 aaPredicted RBP5.51□□□□□ -1.53
ATG4A-204ENST00000372246 GJA9P57773 515 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 SULT2A1Q06520 285 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 ART3Q13508 389 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 ACAP2Q15057 778 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 CERCAMQ5T4B2 595 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 FSTL4Q6MZW2 842 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 PMF1Q6P1K2 205 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 TMEM53Q6P2H8 277 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 Q6ZNX1 250 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 STRA8Q7Z7C7 330 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 C14orf80Q86SX3 495 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 USP37Q86T82 979 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 NT5DC4Q86YG4 428 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 RNF135Q8IUD6 432 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 HERC6Q8IVU3 1022 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 ZC3H7AQ8IWR0 971 aaKnown RBP5.51□□□□□ -1.53
ATG4A-204ENST00000372246 AHI1Q8N157 1196 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 BBS5Q8N3I7 341 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 KYQ8NBH2 561 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 CCNYQ8ND76 341 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 NUDT8Q8WV74 236 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 KCTD4Q8WVF5 259 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 CANT1Q8WVQ1 401 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 JADE3Q92613 823 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 ABHD8Q96I13 439 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 KCNK16Q96T55 309 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 HEPHQ9BQS7 1158 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 GCOM2Q9BZD3 368 aaPredicted RBP5.51□□□□□ -1.53
ATG4A-204ENST00000372246 PPCSQ9HAB8 311 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 FAIMQ9NVQ4 179 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 MOCS1Q9NZB8 636 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 PAK5Q9P286 719 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 SIX4Q9UIU6 781 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 SLC39A10Q9ULF5 831 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 CNTN6Q9UQ52 1028 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 EFR3BQ9Y2G0 817 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 COQ6Q9Y2Z9 468 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 PCDHA11Q9Y5I1 949 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 COPG1Q9Y678 874 aaKnown RBP5.51□□□□□ -1.53
ATG4A-204ENST00000372246 A0A0C4DFX4 3053 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 ADGRA2Q96PE1 1338 aa5.51□□□□□ -1.53
ATG4A-204ENST00000372246 A0A096LPK6 155 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 APOL1O14791 398 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 AKAP10O43572 662 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 STRNO43815 780 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 IQCF3P0C7M6 154 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 KCNA2P16389 499 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 NFKBIAP25963 317 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 YWHAQP27348 245 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 PTPN7P35236 360 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 HOXD12P35452 270 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 PTPN9P43378 593 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 BAG6P46379 1132 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 GRIA4P48058 902 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 CNTN2Q02246 1040 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 NIPAL4Q0D2K0 466 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 TRAF2Q12933 501 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 PPP1R8Q12972 351 aaKnown RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 ITGADQ13349 1161 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 PTK2BQ14289 1009 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 CAPRIN1Q14444 709 aaKnown RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 TAZQ16635 292 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 DGKDQ16760 1214 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 ZIK1Q3SY52 487 aaPredicted RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 LINC01559Q495D7 138 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 LGSNQ5TDP6 509 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 ANKRD34AQ69YU3 496 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 LYSMD3Q7Z3D4 306 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 SETD3Q86TU7 594 aaPredicted RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 FAM131BQ86XD5 332 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 CENPSQ8N2Z9 138 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 SLC15A4Q8N697 577 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 NIPA2Q8N8Q9 360 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 ZNF511Q8NB15 262 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 COLGALT1Q8NBJ5 622 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 CYGBQ8WWM9 190 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 ZNF669Q96BR6 464 aaPredicted RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 SCYL1Q96KG9 808 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 NLRP4Q96MN2 994 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 FERMT1Q9BQL6 677 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 NEURL2Q9BR09 285 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 CORO1BQ9BR76 489 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 RTKNQ9BST9 563 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 EPB41L1Q9H4G0 881 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 TASP1Q9H6P5 420 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 MINDY3Q9H8M7 445 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 EHMT1Q9H9B1 1298 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 RSAD1Q9HA92 442 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 PNPLA8Q9NP80 782 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 SMOXQ9NWM0 555 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 DNAJC28Q9NX36 388 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 DUS2Q9NX74 493 aaKnown RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 C6orf203Q9P0P8 240 aaPredicted RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 THEGQ9P2T0 379 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 PAIP2BQ9ULR5 123 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms