RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ZCCHC9Q8N567 271 aaKnown RBP15.45■□□□□ 0.06
COL5A1-201ENST00000371817 USP7Q93009 1102 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 ZNF446Q9NWS9 450 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 UGT2B11O75310 529 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 PSKH1P11801 424 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 CLK2P49760 499 aaKnown RBP15.45■□□□□ 0.06
COL5A1-201ENST00000371817 PPP2R2BQ00005 443 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 BIKQ13323 160 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 PTCHD4Q6ZW05 846 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 SH3RF3Q8TEJ3 882 aaPredicted RBP15.45■□□□□ 0.06
COL5A1-201ENST00000371817 SLC20A1Q8WUM9 679 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 AKAP1Q92667 903 aaKnown RBP eCLIP15.45■□□□□ 0.06
COL5A1-201ENST00000371817 POMKQ9H5K3 350 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 URB1O60287 2271 aaKnown RBP15.45■□□□□ 0.06
COL5A1-201ENST00000371817 M0R036 132 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 POLD2P49005 469 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 PIK3R6Q5UE93 754 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 REPS1Q96D71 796 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 ZNF350Q9GZX5 532 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 PIDD1Q9HB75 910 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 UCKL1Q9NWZ5 548 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 HOXC10Q9NYD6 342 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 ADGRL3Q9HAR2 1447 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 MYO5CQ9NQX4 1742 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 RP9Q8TA86 221 aaKnown RBP15.45■□□□□ 0.06
COL5A1-201ENST00000371817 SPATA33Q96N06 139 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 CATSPERZQ9NTU4 200 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 USP17L10C9JJH3 530 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 GH2P01242 217 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 CUL2Q13617 745 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 TTC37Q6PGP7 1564 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 IL27RAQ6UWB1 636 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 PTCD2Q8WV60 388 aaKnown RBP15.45■□□□□ 0.06
COL5A1-201ENST00000371817 KAT5Q92993 513 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 PEX16Q9Y5Y5 336 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 FAM237BA0A1B0GVD1 139 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 HIST1H2ABP04908 130 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 CYP4B1P13584 511 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 CYP11B1P15538 503 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 F8A1P23610 371 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 ADRA1DP25100 572 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 UGT2B15P54855 530 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 EPHA7Q15375 998 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 C6orf52Q5T4I8 152 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 HIST3H2AQ7L7L0 130 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 HIST1H2ACQ93077 130 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 PBRM1Q86U86 1689 aa15.45■□□□□ 0.06
COL5A1-201ENST00000371817 CROCC2H7BZ55 1655 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 SLC5A3P53794 718 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 IQSEC1Q6DN90 963 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 DNAJB14Q8TBM8 379 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 HPDLQ96IR7 371 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 KLHL5Q96PQ7 755 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 CDH19Q9H159 772 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 ELL3Q9HB65 397 aaPredicted RBP15.44■□□□□ 0.06
COL5A1-201ENST00000371817 ARHGEF40Q8TER5 1519 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 DDX3YO15523 660 aaKnown RBP15.44■□□□□ 0.06
COL5A1-201ENST00000371817 LTFP02788 710 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 PGAM1P18669 254 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 DRD4P21917 467 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 PCSK1P29120 753 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 USP4Q13107 963 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 GRB14Q14449 540 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 CIR1Q86X95 450 aaPredicted RBP15.44■□□□□ 0.06
COL5A1-201ENST00000371817 CKLFQ9UBR5 152 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 PIK3CGP48736 1102 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 POU6F1Q14863 301 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 ARCQ7LC44 396 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 AMIGO2Q86SJ2 522 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 ING5Q8WYH8 240 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 PFDN5Q99471 154 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 ALG5Q9Y673 324 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 POLRMTO00411 1230 aaKnown RBP15.44■□□□□ 0.06
COL5A1-201ENST00000371817 ALX1Q15699 326 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 C4orf46Q504U0 113 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 ANKRD13AQ8IZ07 590 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 UBA3Q8TBC4 463 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 RAB2BQ8WUD1 216 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 C1GALT1C1Q96EU7 318 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 OSGEPQ9NPF4 335 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 SHANK2Q9UPX8 1470 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 CYP2C9P11712 490 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 PGDP52209 483 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 SV2CQ496J9 727 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 RAB11FIP2Q7L804 512 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 RBM4BQ9BQ04 359 aaKnown RBP15.44■□□□□ 0.06
COL5A1-201ENST00000371817 RBM4Q9BWF3 364 aaKnown RBP15.44■□□□□ 0.06
COL5A1-201ENST00000371817 SLC4A5Q9BY07 1137 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 LACRTQ9GZZ8 138 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 CPVLQ9H3G5 476 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 CHST10O43529 356 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 OR2B6P58173 313 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 TMC7Q7Z402 723 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 POF1BQ8WVV4 589 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 PHF20Q9BVI0 1012 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.44■□□□□ 0.06
COL5A1-201ENST00000371817 N6AMT1Q9Y5N5 214 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 WRBO00258 174 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 SERPINA3P01011 423 aa15.44■□□□□ 0.06
COL5A1-201ENST00000371817 GNAO1P09471 354 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms