RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 STN1Q9H668 368 aaKnown RBP5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 CDHR5Q9HBB8 845 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 RGS18Q9NS28 235 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 COMMD8Q9NX08 183 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 SYBUQ9NX95 663 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 GNEQ9Y223 722 aaKnown RBP5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 HBS1LQ9Y450 684 aaKnown RBP5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 TLL2Q9Y6L7 1015 aa5.4□□□□□ -1.55
SMNDC1-202ENST00000369603 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 FAM237BA0A1B0GVD1 139 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 SOCS7O14512 581 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 GNGT2O14610 69 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 EDF1O60869 148 aaKnown RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 CLDN11O75508 207 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 IGSF6O95976 241 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 HOXA11P31270 313 aaPredicted RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 OR1D2P34982 312 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 CD86P42081 329 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 HK2P52789 917 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 SLC18A1P54219 525 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 NAA20P61599 178 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 KCNJ2P63252 427 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 CRADDP78560 199 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 POU4F1Q01851 419 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 SYTL3Q4VX76 610 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 SH3PXD2AQ5TCZ1 1133 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 TXNRD3NBQ6F5E7 133 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 WDTC1Q8N5D0 677 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 TDRD5Q8NAT2 981 aaKnown RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 ATAD1Q8NBU5 361 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 HJURPQ8NCD3 748 aaPredicted RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 PIWIL2Q8TC59 973 aaKnown RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 CLEC4CQ8WTT0 213 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 UCMAQ8WVF2 138 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 CCDC124Q96CT7 223 aaKnown RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 ATXN3LQ9H3M9 355 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 EFCAB1Q9HAE3 211 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 GID8Q9NWU2 228 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 SMPD4Q9NXE4 827 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 THEGQ9P2T0 379 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 RABGEF1Q9UJ41 708 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 SLC27A5Q9Y2P5 690 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 ORC6Q9Y5N6 252 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 E9PAM4 449 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 FCHO1O14526 889 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 AIM2O14862 343 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 USP1O94782 785 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 ADH1AP07327 375 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 TCF4P15884 667 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 ZNF7P17097 686 aaPredicted RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 DDX5P17844 614 aaKnown RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 KCNA4P22459 653 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 PPP3CCP48454 512 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 MAPKAPK2P49137 400 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 NDST2P52849 883 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 GDF10P55107 478 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 WNT3AP56704 352 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 WNT7BP56706 349 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 ZNF33AQ06730 810 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 DUSP4Q13115 394 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 TRIP4Q15650 581 aaPredicted RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 CA9Q16790 459 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 GLT6D1Q7Z4J2 308 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 TMPRSS6Q8IU80 811 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 ZNF567Q8N184 647 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 MYO1HQ8N1T3 1032 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 RTL3Q8N8U3 475 aaKnown RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 DBF4BQ8NFT6 615 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 PBXIP1Q96AQ6 731 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 NPY6RQ99463 290 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 SEMA3CQ99985 751 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 MMADHCQ9H3L0 296 aaPredicted RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 RHOJQ9H4E5 214 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 SUDS3Q9H7L9 328 aaPredicted RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 TCF7L2Q9NQB0 619 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 SPG21Q9NZD8 308 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.39□□□□□ -1.552e-6■■■■□ 20.2
SMNDC1-202ENST00000369603 GMIPQ9P107 970 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 ZNF510Q9Y2H8 683 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 TRAV19A0A0A6YYK7 116 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 A0A1W2PPM1 405 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 KCNU1A8MYU2 1149 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 TMEM114B3SHH9 223 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 MATN3O15232 486 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 IRAK2O43187 625 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 TSPAN3O60637 253 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 CLASP2O75122 1294 aaKnown RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 RASSF9O75901 435 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 COL6A2P12110 1019 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 CKBP12277 381 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 ENO3P13929 434 aaPredicted RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 HDCP19113 662 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 CRHR1P34998 444 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 SKIV2L2P42285 1042 aaKnown RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 HNRNPDQ14103 355 aaKnown RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 KRT33BQ14525 404 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 FASTKD3Q14CZ7 662 aaKnown RBP5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 PPM1LQ5SGD2 360 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 ARMC12Q5T9G4 340 aa5.39□□□□□ -1.55
SMNDC1-202ENST00000369603 SDHAF4Q5VUM1 108 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms