RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 DNAJC7Q99615 494 aa20.97■□□□□ 0.95
SMNDC1-201ENST00000369592 ZDHHC5Q9C0B5 715 aa20.97■□□□□ 0.95
SMNDC1-201ENST00000369592 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.97■□□□□ 0.958e-7■□□□□ 9.4
SMNDC1-201ENST00000369592 ACTL7AQ9Y615 435 aa20.97■□□□□ 0.95
SMNDC1-201ENST00000369592 SCINQ9Y6U3 715 aa20.97■□□□□ 0.95
SMNDC1-201ENST00000369592 TP53BP1Q12888 1972 aaPredicted RBP20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 EIF3CLB5ME19 914 aaKnown RBP20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 PLK4O00444 970 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 LATO43561 262 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 LRCH4O75427 683 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 SYPP08247 313 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 CSRP1P21291 193 aaKnown RBP20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 EPHB2P29323 1055 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 MIPP30301 263 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 CHRNA3P32297 505 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 TAS2R38P59533 333 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 GRIK2Q13002 908 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 ASTE1Q2TB18 679 aaPredicted RBP20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 FAM46CQ5VWP2 391 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 DPY19L3Q6ZPD9 716 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 PSTKQ8IV42 348 aaKnown RBP20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 MINDY1Q8N5J2 469 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 PCDH20Q8N6Y1 951 aaKnown RBP20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 CHST14Q8NCH0 376 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 EIF3CQ99613 913 aaKnown RBP20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 EPAS1Q99814 870 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 KLC2Q9H0B6 622 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 KDM4CQ9H3R0 1056 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 MRPL47Q9HD33 250 aaKnown RBP20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 TM9SF3Q9HD45 589 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 WASF2Q9Y6W5 498 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 TMEM131Q92545 1883 aa20.96■□□□□ 0.95
SMNDC1-201ENST00000369592 A0A1W2PPC4 97 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 LRRC72A6NJI9 287 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 PLRG1O43660 514 aaKnown RBP20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 KDELR3O43731 214 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 RAMP2O60895 175 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 KCNK5O95279 499 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 CYP1A2P05177 515 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 PCK1P35558 622 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 MAPK8P45983 427 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 YBEYP58557 167 aaPredicted RBP20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 CNTN1Q12860 1018 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 ACAP1Q15027 740 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 POLD3Q15054 466 aaPredicted RBP20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 ERMARDQ5T6L9 678 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 PIP5KL1Q5T9C9 394 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 SPECC1LQ69YQ0 1117 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 VSTM4Q8IW00 320 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 OR2I1PQ8NGU4 316 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 GANCQ8TET4 914 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 SNRNP25Q9BV90 132 aaKnown RBP20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 THAP2Q9H0W7 228 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 MIR1-1HGQ9H1L0 117 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 GPATCH2LQ9NWQ4 482 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 AP4E1Q9UPM8 1137 aa20.95■□□□□ 0.94
SMNDC1-201ENST00000369592 C1QTNF3-AMACRE9PGA6 284 aa20.94■□□□□ 0.94
SMNDC1-201ENST00000369592 FGF10O15520 208 aaPredicted RBP20.94■□□□□ 0.94
SMNDC1-201ENST00000369592 CBFA2T2O43439 604 aa20.94■□□□□ 0.94
SMNDC1-201ENST00000369592 FSBPO95073 299 aa20.94■□□□□ 0.94
SMNDC1-201ENST00000369592 TPM3P06753 285 aa20.94■□□□□ 0.94
SMNDC1-201ENST00000369592 CD59P13987 128 aa20.94■□□□□ 0.94
SMNDC1-201ENST00000369592 GRIA4P48058 902 aa20.94■□□□□ 0.94
SMNDC1-201ENST00000369592 ALKBH5Q6P6C2 394 aaKnown RBP20.94■□□□□ 0.94
SMNDC1-201ENST00000369592 NIPA2Q8N8Q9 360 aa20.94■□□□□ 0.94
SMNDC1-201ENST00000369592 OR14C36Q8NHC7 312 aa20.94■□□□□ 0.94
SMNDC1-201ENST00000369592 ARRDC3Q96B67 414 aa20.94■□□□□ 0.94
SMNDC1-201ENST00000369592 TNKS2Q9H2K2 1166 aa20.94■□□□□ 0.94
SMNDC1-201ENST00000369592 LRRC19Q9H756 370 aa20.94■□□□□ 0.94
SMNDC1-201ENST00000369592 MYO1AQ9UBC5 1043 aa20.94■□□□□ 0.94
SMNDC1-201ENST00000369592 TPX2Q9ULW0 747 aaKnown RBP20.94■□□□□ 0.94
SMNDC1-201ENST00000369592 FCF1Q9Y324 198 aaKnown RBP20.94■□□□□ 0.94
SMNDC1-201ENST00000369592 FAM208BQ5VWN6 2430 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 CREB3O43889 395 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 RNF8O76064 485 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 DESP17661 470 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 IL1R2P27930 398 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 HCAR3P49019 387 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 CSNK1EP49674 416 aaKnown RBP20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 AFF3P51826 1226 aaKnown RBP20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 PPP2CBP62714 309 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 PPP2CAP67775 309 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 SERINC3Q13530 473 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 TRIM14Q14142 442 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 CARD16Q5EG05 197 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 AFMIDQ63HM1 303 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 VPS36Q86VN1 386 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 RNF214Q8ND24 703 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 OR8K1Q8NGG5 319 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 ARHGEF26Q96DR7 871 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 CCDC114Q96M63 670 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 KCTD15Q96SI1 283 aaPredicted RBP20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 NCAPGQ9BPX3 1015 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 GTPBP2Q9BX10 602 aaKnown RBP20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 CATSPERBQ9H7T0 1116 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 PCSK1NQ9UHG2 260 aa20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 FARP1Q9Y4F1 1045 aaPredicted RBP20.93■□□□□ 0.94
SMNDC1-201ENST00000369592 A0A1B0GVT2 93 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms