RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 SLFN12Q8IYM2 578 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 GON7Q9BXV9 100 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 AGXT2Q9BYV1 514 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 VPS33BQ9H267 617 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 XKR8Q9H6D3 395 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 SYNDIG1Q9H7V2 258 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 E2F8A0AVK6 867 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 NDUFS2O75306 463 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 RAD17O75943 681 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 GDF11O95390 407 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 PROS1P07225 676 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 IL1R1P14778 569 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 SFNP31947 248 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 GRIA3P42263 894 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 PLCL1Q15111 1095 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 ZNF181Q2M3W8 571 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 COLEC12Q5KU26 742 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 TXNDC11Q6PKC3 985 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 DPH6Q7L8W6 267 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 SNX20Q7Z614 316 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 ZDHHC13Q8IUH4 622 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 MASTLQ96GX5 879 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 METTL2AQ96IZ6 378 aaKnown RBP10.56□□□□□ -0.72
PRDM1-201ENST00000369089 SLC4A9Q96Q91 983 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 TUT1Q9H6E5 874 aaKnown RBP10.56□□□□□ -0.72
PRDM1-201ENST00000369089 SSU72Q9NP77 194 aaKnown RBP10.56□□□□□ -0.72
PRDM1-201ENST00000369089 NDUFAF4Q9P032 175 aa10.56□□□□□ -0.72
PRDM1-201ENST00000369089 ITSN1Q15811 1721 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 A8MV72 311 aaPredicted RBP10.55□□□□□ -0.72
PRDM1-201ENST00000369089 WRBO00258 174 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 NUDT1P36639 197 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 HK2P52789 917 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 PTPN5P54829 565 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 PSME3P61289 254 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 NFATC3Q12968 1075 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 STILQ15468 1287 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 ZIK1Q3SY52 487 aaPredicted RBP10.55□□□□□ -0.72
PRDM1-201ENST00000369089 CIAPIN1Q6FI81 312 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 LRRC8DQ7L1W4 858 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 ADAMTS16Q8TE57 1224 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 MYDGFQ969H8 173 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 ACAD9Q9H845 621 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 CNOT11Q9UKZ1 510 aaKnown RBP10.55□□□□□ -0.72
PRDM1-201ENST00000369089 RBAK-RBAKDNI3L0D1 243 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 SGCEO43556 437 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 KELP23276 732 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 AKAP5P24588 427 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 ERVK-8P63133 956 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 C1QBPQ07021 282 aaKnown RBP10.55□□□□□ -0.72
PRDM1-201ENST00000369089 KIZQ2M2Z5 673 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 AKIRIN2Q53H80 203 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 CENPPQ6IPU0 288 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 Q8N9G6 341 aaPredicted RBP10.55□□□□□ -0.72
PRDM1-201ENST00000369089 SMG8Q8ND04 991 aaKnown RBP10.55□□□□□ -0.72
PRDM1-201ENST00000369089 SPATA20Q8TB22 786 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 FANK1Q8TC84 345 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 SNAPC3Q92966 411 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 PTCD3Q96EY7 689 aaKnown RBP10.55□□□□□ -0.72
PRDM1-201ENST00000369089 COPS4Q9BT78 406 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 TEX12Q9BXU0 123 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 TRIT1Q9H3H1 467 aaKnown RBP10.55□□□□□ -0.72
PRDM1-201ENST00000369089 IL20Q9NYY1 176 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 GABBR1Q9UBS5 961 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 GLS2Q9UI32 602 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 GRIP1Q9Y3R0 1128 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 FAM240BA0A1B0GVZ2 78 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 ROR1Q01973 937 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 ITPK1Q13572 414 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 ESCO2Q56NI9 601 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 DCAF15Q66K64 600 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 SCYL2Q6P3W7 929 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 ZCCHC23Q6ZST2 131 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 FBXO33Q7Z6M2 555 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 NLRX1Q86UT6 975 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 LRRC71Q8N4P6 559 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 DNAAF3Q8N9W5 541 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 SLC44A5Q8NCS7 719 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 FAM45AQ8TCE6 357 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 KIFC1Q9BW19 673 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 BLOC1S4Q9NUP1 217 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 IMPAD1Q9NX62 359 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 SMPD3Q9NY59 655 aaPredicted RBP10.55□□□□□ -0.72
PRDM1-201ENST00000369089 ADAMTS6Q9UKP5 1117 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 CDC14AQ9UNH5 594 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 SNX8Q9Y5X2 465 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 A0A1W2PPM1 405 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 FOXO6A8MYZ6 492 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 ALOX15BO15296 676 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 NOL4O94818 638 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 XPAP23025 273 aaPredicted RBP10.55□□□□□ -0.72
PRDM1-201ENST00000369089 TIE1P35590 1138 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 SLC18A1P54219 525 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 CSNK2BP67870 215 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 PLD1Q13393 1074 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 RAB39AQ14964 217 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 VPS72Q15906 364 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 CCBE1Q6UXH8 406 aaPredicted RBP10.55□□□□□ -0.72
PRDM1-201ENST00000369089 THAP5Q7Z6K1 395 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 PTAR1Q7Z6K3 402 aaPredicted RBP10.55□□□□□ -0.72
PRDM1-201ENST00000369089 CBR4Q8N4T8 237 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms