RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 SLC25A51Q9H1U9 297 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 LRRC40Q9H9A6 602 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 GOLGA6AQ9NYA3 693 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 PLK2Q9NYY3 685 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 CLEC1BQ9P126 229 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 UBA2Q9UBT2 640 aaPredicted RBP24.3■■□□□ 1.48
SNX3-203ENST00000368979 CLEC4EQ9ULY5 219 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 ZMPSTE24O75844 475 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 ANXA9O76027 345 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 ELK3P41970 407 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 ARF5P84085 180 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 ZNF844Q08AG5 666 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 GPS2Q13227 327 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 SPARCL1Q14515 664 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 RFTN1Q14699 578 aaPredicted RBP24.3■■□□□ 1.48
SNX3-203ENST00000368979 FAM78AQ5JUQ0 283 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 GET4Q7L5D6 327 aaPredicted RBP24.3■■□□□ 1.48
SNX3-203ENST00000368979 SPATA22Q8NHS9 363 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 FIBINQ8TAL6 211 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 PYROXD1Q8WU10 500 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 RSPRY1Q96DX4 576 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 LRRC3BQ96PB8 259 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 LRRC4CQ9HCJ2 640 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 GDE1Q9NZC3 331 aa24.3■■□□□ 1.48
SNX3-203ENST00000368979 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.3■■□□□ 1.48
SNX3-203ENST00000368979 MYO18AQ92614 2054 aaKnown RBP24.29■■□□□ 1.48
SNX3-203ENST00000368979 TMEM265A0A087WTH1 108 aa24.29■■□□□ 1.48
SNX3-203ENST00000368979 A0A1W2PPC1 479 aa24.29■■□□□ 1.48
SNX3-203ENST00000368979 SLC9A3R1O14745 358 aaPredicted RBP24.29■■□□□ 1.48
SNX3-203ENST00000368979 SYF2O95926 243 aaKnown RBP24.29■■□□□ 1.48
SNX3-203ENST00000368979 GEMP55040 296 aa24.29■■□□□ 1.48
SNX3-203ENST00000368979 TMEM25Q86YD3 366 aa24.29■■□□□ 1.48
SNX3-203ENST00000368979 IGDCC3Q8IVU1 814 aa24.29■■□□□ 1.48
SNX3-203ENST00000368979 DCAF4L2Q8NA75 395 aa24.29■■□□□ 1.48
SNX3-203ENST00000368979 SMARCD2Q92925 531 aa24.29■■□□□ 1.48
SNX3-203ENST00000368979 IRF7Q92985 503 aa24.29■■□□□ 1.48
SNX3-203ENST00000368979 IMP4Q96G21 291 aaKnown RBP24.29■■□□□ 1.48
SNX3-203ENST00000368979 SIGLEC10Q96LC7 697 aa24.29■■□□□ 1.48
SNX3-203ENST00000368979 LINC00597Q9H2U6 94 aa24.29■■□□□ 1.48
SNX3-203ENST00000368979 TTYH1Q9H313 450 aaPredicted RBP24.29■■□□□ 1.48
SNX3-203ENST00000368979 SPHK2Q9NRA0 654 aa24.29■■□□□ 1.48
SNX3-203ENST00000368979 UBP1Q9NZI7 540 aa24.29■■□□□ 1.48
SNX3-203ENST00000368979 CHMP2BQ9UQN3 213 aa24.29■■□□□ 1.48
SNX3-203ENST00000368979 ACTL7AQ9Y615 435 aa24.29■■□□□ 1.48
SNX3-203ENST00000368979 WNT6Q9Y6F9 365 aa24.29■■□□□ 1.48
SNX3-203ENST00000368979 CDH23Q9H251 3354 aa24.29■■□□□ 1.48
SNX3-203ENST00000368979 H3BQF6 201 aa24.28■■□□□ 1.48
SNX3-203ENST00000368979 CBX4O00257 560 aa24.28■■□□□ 1.48
SNX3-203ENST00000368979 MT-CYBP00156 380 aaPredicted RBP24.28■■□□□ 1.48
SNX3-203ENST00000368979 TSHRP16473 764 aa24.28■■□□□ 1.48
SNX3-203ENST00000368979 GPX6P59796 221 aa24.28■■□□□ 1.48
SNX3-203ENST00000368979 MAXP61244 160 aa24.28■■□□□ 1.48
SNX3-203ENST00000368979 LMAN2Q12907 356 aa24.28■■□□□ 1.48
SNX3-203ENST00000368979 OLIG2Q13516 323 aa24.28■■□□□ 1.48
SNX3-203ENST00000368979 ZNF235Q14590 738 aa24.28■■□□□ 1.48
SNX3-203ENST00000368979 ALG1LQ6GMV1 187 aa24.28■■□□□ 1.48
SNX3-203ENST00000368979 CCDC117Q8IWD4 279 aaPredicted RBP24.28■■□□□ 1.48
SNX3-203ENST00000368979 ATP11CQ8NB49 1132 aa24.28■■□□□ 1.48
SNX3-203ENST00000368979 UHMK1Q8TAS1 419 aaKnown RBP24.28■■□□□ 1.48
SNX3-203ENST00000368979 LMLNQ96KR4 655 aa24.28■■□□□ 1.48
SNX3-203ENST00000368979 S1PR5Q9H228 398 aa24.28■■□□□ 1.48
SNX3-203ENST00000368979 MED4Q9NPJ6 270 aa24.28■■□□□ 1.48
SNX3-203ENST00000368979 CASS4Q9NQ75 786 aa24.28■■□□□ 1.48
SNX3-203ENST00000368979 MARK1Q9P0L2 795 aa24.28■■□□□ 1.48
SNX3-203ENST00000368979 KIAA1522Q9P206 1035 aaPredicted RBP24.28■■□□□ 1.48
SNX3-203ENST00000368979 VPS28Q9UK41 221 aa24.28■■□□□ 1.48
SNX3-203ENST00000368979 OPA1O60313 960 aa24.27■■□□□ 1.48
SNX3-203ENST00000368979 SNAP91O60641 907 aa24.27■■□□□ 1.48
SNX3-203ENST00000368979 TBX10O75333 385 aa24.27■■□□□ 1.48
SNX3-203ENST00000368979 CD160O95971 181 aa24.27■■□□□ 1.48
SNX3-203ENST00000368979 NIPAL4Q0D2K0 466 aa24.27■■□□□ 1.48
SNX3-203ENST00000368979 CTC1Q2NKJ3 1217 aa24.27■■□□□ 1.48
SNX3-203ENST00000368979 CEP85LQ5SZL2 805 aa24.27■■□□□ 1.48
SNX3-203ENST00000368979 NAPEPLDQ6IQ20 393 aa24.27■■□□□ 1.48
SNX3-203ENST00000368979 PRPF39Q86UA1 669 aaKnown RBP24.27■■□□□ 1.48
SNX3-203ENST00000368979 ADGRG2Q8IZP9 1017 aa24.27■■□□□ 1.48
SNX3-203ENST00000368979 BBS5Q8N3I7 341 aa24.27■■□□□ 1.48
SNX3-203ENST00000368979 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.27■■□□□ 1.48
SNX3-203ENST00000368979 ARRDC2Q8TBH0 407 aa24.27■■□□□ 1.48
SNX3-203ENST00000368979 TADA1Q96BN2 335 aa24.27■■□□□ 1.48
SNX3-203ENST00000368979 MGME1Q9BQP7 344 aa24.27■■□□□ 1.48
SNX3-203ENST00000368979 TMEM109Q9BVC6 243 aa24.27■■□□□ 1.48
SNX3-203ENST00000368979 POLR1EQ9GZS1 481 aaKnown RBP24.27■■□□□ 1.48
SNX3-203ENST00000368979 TRPV4Q9HBA0 871 aa24.27■■□□□ 1.48
SNX3-203ENST00000368979 SEPT3Q9UH03 358 aa24.27■■□□□ 1.48
SNX3-203ENST00000368979 MTCH2Q9Y6C9 303 aa24.27■■□□□ 1.48
SNX3-203ENST00000368979 MUSKO15146 869 aa24.26■■□□□ 1.47
SNX3-203ENST00000368979 USP12O75317 370 aa24.26■■□□□ 1.47
SNX3-203ENST00000368979 MMP2P08253 660 aa24.26■■□□□ 1.47
SNX3-203ENST00000368979 VIPR2P41587 438 aa24.26■■□□□ 1.47
SNX3-203ENST00000368979 DSC2Q02487 901 aa24.26■■□□□ 1.47
SNX3-203ENST00000368979 IFFO1Q0D2I5 559 aa24.26■■□□□ 1.47
SNX3-203ENST00000368979 MPP3Q13368 585 aa24.26■■□□□ 1.47
SNX3-203ENST00000368979 HABP4Q5JVS0 413 aaKnown RBP24.26■■□□□ 1.47
SNX3-203ENST00000368979 KDELC1Q6UW63 502 aa24.26■■□□□ 1.47
SNX3-203ENST00000368979 APCDD1Q8J025 514 aa24.26■■□□□ 1.47
SNX3-203ENST00000368979 OR52K1Q8NGK4 314 aa24.26■■□□□ 1.47
SNX3-203ENST00000368979 OSCP1Q8WVF1 389 aa24.26■■□□□ 1.47
SNX3-203ENST00000368979 PSKH2Q96QS6 385 aa24.26■■□□□ 1.47
SNX3-203ENST00000368979 OBP2AQ9NY56 170 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms