RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 PALMDQ9NP74 551 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 STX16-NPEPL1H3BU86 382 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 NEMP1O14524 444 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 TIMM44O43615 452 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 ZNF189O75820 626 aaPredicted RBP17.69■□□□□ 0.42
CHTOP-203ENST00000368690 LTFP02788 710 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 CHRNGP07510 517 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 CSRP3P50461 194 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 PSME3P61289 254 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 CCNA1P78396 465 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 SLC6A3Q01959 620 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 NHSL2Q5HYW2 709 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 SAPCD2Q86UD0 394 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 C1orf127Q8N9H9 656 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 GTF3C2Q8WUA4 911 aaPredicted RBP17.69■□□□□ 0.42
CHTOP-203ENST00000368690 ITPKCQ96DU7 683 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 MAELQ96JY0 434 aaKnown RBP17.69■□□□□ 0.42
CHTOP-203ENST00000368690 CSPG4P5Q96PW8 444 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 PARK7Q99497 189 aaKnown RBP17.69■□□□□ 0.42
CHTOP-203ENST00000368690 LRRC40Q9H9A6 602 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 TDRKHQ9Y2W6 561 aaKnown RBP17.69■□□□□ 0.42
CHTOP-203ENST00000368690 ZNF711Q9Y462 761 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 PCDHGA7Q9Y5G6 932 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 LCTP09848 1927 aa17.69■□□□□ 0.42
CHTOP-203ENST00000368690 SOWAHBA6NEL2 793 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 TRIM24O15164 1050 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 PAPSS1O43252 624 aaPredicted RBP17.68■□□□□ 0.42
CHTOP-203ENST00000368690 GAS2O43903 313 aaKnown RBP17.68■□□□□ 0.42
CHTOP-203ENST00000368690 GRAP2O75791 330 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 PIGNO95427 931 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 AMHP03971 560 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 C2P06681 752 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 PFKMP08237 780 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 BMP2P12643 396 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 CYP3A5P20815 502 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 PSMD7P51665 324 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 SNX16P57768 344 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 MTA1Q13330 715 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 MXD4Q14582 209 aaPredicted RBP17.68■□□□□ 0.42
CHTOP-203ENST00000368690 NCBP2-AS2Q69YL0 99 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 STRA8Q7Z7C7 330 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 ZDHHC17Q8IUH5 632 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 RNF148Q8N7C7 305 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 MFSD2AQ8NA29 543 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 LRTOMTQ8WZ04 291 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 TFAP2CQ92754 450 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 KHSRPQ92945 711 aaKnown RBP eCLIP17.68■□□□□ 0.421e-9■□□□□ 11.3
CHTOP-203ENST00000368690 C12orf43Q96C57 262 aaKnown RBP17.68■□□□□ 0.42
CHTOP-203ENST00000368690 AGAP3Q96P47 875 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 ACE2Q9BYF1 805 aaPredicted RBP17.68■□□□□ 0.42
CHTOP-203ENST00000368690 RCOR3Q9P2K3 495 aaPredicted RBP17.68■□□□□ 0.42
CHTOP-203ENST00000368690 ABT1Q9ULW3 272 aaKnown RBP17.68■□□□□ 0.42
CHTOP-203ENST00000368690 SLC45A1Q9Y2W3 748 aa17.68■□□□□ 0.42
CHTOP-203ENST00000368690 COPG1Q9Y678 874 aaKnown RBP17.68■□□□□ 0.42
CHTOP-203ENST00000368690 TRIM64BA6NI03 449 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 PDGFRBP09619 1106 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 MLH1P40692 756 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 GRIA4P48058 902 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 RELAQ04206 551 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 MAPRE2Q15555 327 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 ARL13AQ5H913 290 aaPredicted RBP17.67■□□□□ 0.42
CHTOP-203ENST00000368690 TMEM135Q86UB9 458 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 RASAL3Q86YV0 1011 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 CLVS1Q8IUQ0 354 aaPredicted RBP17.67■□□□□ 0.42
CHTOP-203ENST00000368690 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.67■□□□□ 0.42
CHTOP-203ENST00000368690 DQX1Q8TE96 717 aaKnown RBP17.67■□□□□ 0.42
CHTOP-203ENST00000368690 CENPIQ92674 756 aaPredicted RBP17.67■□□□□ 0.42
CHTOP-203ENST00000368690 PBXIP1Q96AQ6 731 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 MCMBPQ9BTE3 642 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 TRPV6Q9H1D0 765 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 DUS2Q9NX74 493 aaKnown RBP17.67■□□□□ 0.42
CHTOP-203ENST00000368690 HEMK1Q9Y5R4 338 aaPredicted RBP17.67■□□□□ 0.42
CHTOP-203ENST00000368690 TRPC5OSA6NMA1 111 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 BOLA2-SMG1P6H3BVE0 249 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 SERPINB7O75635 380 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 GLUD2P49448 558 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 NAA20P61599 178 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 STX5Q13190 355 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 KIZQ2M2Z5 673 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 RGMBQ6NW40 437 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 TMEM110Q86TL2 294 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 HERC6Q8IVU3 1022 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 COLGALT2Q8IYK4 626 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 CXorf38Q8TB03 319 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 AGR3Q8TD06 166 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 TMA16Q96EY4 203 aaKnown RBP17.67■□□□□ 0.42
CHTOP-203ENST00000368690 MPHOSPH6Q99547 160 aaKnown RBP17.67■□□□□ 0.42
CHTOP-203ENST00000368690 C11orf84Q9BUA3 381 aaPredicted RBP17.67■□□□□ 0.42
CHTOP-203ENST00000368690 DHX35Q9H5Z1 703 aaKnown RBP17.67■□□□□ 0.42
CHTOP-203ENST00000368690 RPF1Q9H9Y2 349 aaKnown RBP17.67■□□□□ 0.42
CHTOP-203ENST00000368690 TMEM165Q9HC07 324 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 C20orf96Q9NUD7 363 aaPredicted RBP17.67■□□□□ 0.42
CHTOP-203ENST00000368690 ADA2Q9NZK5 511 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 TSPAN16Q9UKR8 245 aa17.67■□□□□ 0.42
CHTOP-203ENST00000368690 HEATR9A2RTY3 570 aa17.66■□□□□ 0.42
CHTOP-203ENST00000368690 GMPRP36959 345 aa17.66■□□□□ 0.42
CHTOP-203ENST00000368690 SP2Q02086 613 aa17.66■□□□□ 0.42
CHTOP-203ENST00000368690 GSTM4Q03013 218 aa17.66■□□□□ 0.42
CHTOP-203ENST00000368690 TMEM62Q0P6H9 643 aa17.66■□□□□ 0.42
CHTOP-203ENST00000368690 ITPRIPL1Q6GPH6 555 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms