RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 DCP1BQ8IZD4 617 aaKnown RBP9.04□□□□□ -0.96
TPM3-213ENST00000368545 SCML4Q8N228 414 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 PRELID2Q8N945 189 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 NANOS1Q8WY41 292 aaKnown RBP9.04□□□□□ -0.96
TPM3-213ENST00000368545 MAGOHBQ96A72 148 aaKnown RBP9.04□□□□□ -0.96
TPM3-213ENST00000368545 CFAP57Q96MR6 1250 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 TBCBQ99426 244 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 SMOQ99835 787 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 TRIM62Q9BVG3 475 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 LRRC19Q9H756 370 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 DMAP1Q9NPF5 467 aaPredicted RBP9.04□□□□□ -0.96
TPM3-213ENST00000368545 GDF3Q9NR23 364 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 BCCIPQ9P287 314 aaKnown RBP eCLIP9.04□□□□□ -0.96
TPM3-213ENST00000368545 PRG3Q9Y2Y8 225 aaPredicted RBP9.04□□□□□ -0.96
TPM3-213ENST00000368545 PCDHGA2Q9Y5H1 932 aa9.04□□□□□ -0.96
TPM3-213ENST00000368545 LRRD1A4D1F6 860 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 GRAP2O75791 330 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 LTFP02788 710 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 SOD2P04179 222 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 CKMP06732 381 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 ASGR2P07307 311 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 RALAP11233 206 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 ADH5P11766 374 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 TCF4P15884 667 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 SERPINB3P29508 390 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 MIPP30301 263 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 MATKP42679 507 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 TKTL1P51854 596 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 GUCY2DQ02846 1103 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 CUL1Q13616 776 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 SIX1Q15475 284 aaPredicted RBP9.03□□□□□ -0.96
TPM3-213ENST00000368545 CCDC142Q17RM4 750 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 TRNP1Q6NT89 227 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 PGM2L1Q6PCE3 622 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 CCDC137Q6PK04 289 aaKnown RBP9.03□□□□□ -0.96
TPM3-213ENST00000368545 CCNI2Q6ZMN8 369 aaPredicted RBP9.03□□□□□ -0.96
TPM3-213ENST00000368545 STRADAQ7RTN6 431 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 ARFGAP1Q8N6T3 406 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 OR10T2Q8NGX3 314 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 GRK7Q8WTQ7 553 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 CLEC4CQ8WTT0 213 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 FAM172AQ8WUF8 416 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 HDAC7Q8WUI4 952 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 TEKT4Q8WW24 435 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 CASP10Q92851 521 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 SLCO2A1Q92959 643 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 FAM149B1Q96BN6 582 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 DDX23Q9BUQ8 820 aaKnown RBP9.03□□□□□ -0.96
TPM3-213ENST00000368545 ZWILCHQ9H900 591 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 EPB41L5Q9HCM4 733 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 GFOD1Q9NXC2 390 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.03□□□□□ -0.96
TPM3-213ENST00000368545 AMACRQ9UHK6 382 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 FEZ2Q9UHY8 353 aaPredicted RBP9.03□□□□□ -0.96
TPM3-213ENST00000368545 STAP1Q9ULZ2 295 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 MYO16Q9Y6X6 1858 aa9.03□□□□□ -0.96
TPM3-213ENST00000368545 hCG_1818297A0A087WSY0 165 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 OR6C75A6NL08 312 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 F8W810 466 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 MDM4O15151 490 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 BEST1O76090 585 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 LRIG2O94898 1065 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 TRUB2O95900 331 aaKnown RBP9.02□□□□□ -0.96
TPM3-213ENST00000368545 COILP38432 576 aaPredicted RBP9.02□□□□□ -0.96
TPM3-213ENST00000368545 CDKN2BP42772 138 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 HTR3AP46098 478 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 SLC11A1P49279 550 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 YWHAZP63104 245 aaKnown RBP9.02□□□□□ -0.96
TPM3-213ENST00000368545 ADCY1Q08828 1119 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 SMARCB1Q12824 385 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 GTF2H3Q13889 308 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 CDO1Q16878 200 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 C15orf59Q2T9L4 293 aaPredicted RBP9.02□□□□□ -0.96
TPM3-213ENST00000368545 BOLA3Q53S33 107 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 BEND6Q5SZJ8 279 aaPredicted RBP9.02□□□□□ -0.96
TPM3-213ENST00000368545 ZNF280DQ6N043 979 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 CES5AQ6NT32 575 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 SPOCD1Q6ZMY3 1216 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 SYDE1Q6ZW31 735 aaPredicted RBP9.02□□□□□ -0.96
TPM3-213ENST00000368545 SPATA2LQ8IUW3 424 aaPredicted RBP9.02□□□□□ -0.96
TPM3-213ENST00000368545 MAP7D3Q8IWC1 876 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 DMRTC2Q8IXT2 367 aaPredicted RBP9.02□□□□□ -0.96
TPM3-213ENST00000368545 PPIL6Q8IXY8 311 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 MFSD2AQ8NA29 543 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 ZMIZ2Q8NF64 920 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 CMASQ8NFW8 434 aaPredicted RBP9.02□□□□□ -0.96
TPM3-213ENST00000368545 IRGQQ8WZA9 623 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 SEC14L1Q92503 715 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 CENPIQ92674 756 aaPredicted RBP9.02□□□□□ -0.96
TPM3-213ENST00000368545 MCMBPQ9BTE3 642 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 ZCWPW1Q9H0M4 648 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 POPDC2Q9HBU9 364 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 SSU72Q9NP77 194 aaKnown RBP9.02□□□□□ -0.96
TPM3-213ENST00000368545 NGRNQ9NPE2 291 aaKnown RBP9.02□□□□□ -0.96
TPM3-213ENST00000368545 RRN3Q9NYV6 651 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 H2AFY2Q9P0M6 372 aaPredicted RBP9.02□□□□□ -0.96
TPM3-213ENST00000368545 B4GALT6Q9UBX8 382 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 GMEB2Q9UKD1 530 aa9.02□□□□□ -0.96
TPM3-213ENST00000368545 C3orf70A6NLC5 250 aaPredicted RBP9.02□□□□□ -0.97
TPM3-213ENST00000368545 ZNF487B1APH4 448 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms