RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 MINDY1Q8N5J2 469 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 CEP76Q8TAP6 659 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 SMARCD1Q96GM5 515 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 RUNDC3BQ96NL0 473 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 ERP44Q9BS26 406 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 CALN1Q9BXU9 219 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 ULBP1Q9BZM6 244 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 FAM114A2Q9NRY5 505 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.24□□□□□ -0.77
TPM3-210ENST00000368530 DNAAF2Q9NVR5 837 aaKnown RBP10.24□□□□□ -0.77
TPM3-210ENST00000368530 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.24□□□□□ -0.77
TPM3-210ENST00000368530 OGFRQ9NZT2 677 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 COX16Q9P0S2 106 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 ITPR1Q14643 2758 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 NBEAQ8NFP9 2946 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 WASH3PC4AMC7 463 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 BHMG1C9JSJ3 638 aaPredicted RBP10.23□□□□□ -0.77
TPM3-210ENST00000368530 DAB1O75553 588 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 CFIP05156 583 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 IRF1P10914 325 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 TYRP14679 529 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 ECHS1P30084 290 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 PI4KAP42356 2102 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 SULT1E1P49888 294 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 CDH6P55285 790 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 CBX1P83916 185 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 RING1Q06587 406 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 MMRN1Q13201 1228 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 COL9A2Q14055 689 aaPredicted RBP10.23□□□□□ -0.77
TPM3-210ENST00000368530 KRT81Q14533 505 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 ZC3H12AQ5D1E8 599 aaKnown RBP10.23□□□□□ -0.77
TPM3-210ENST00000368530 EFHC1Q5JVL4 640 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 DUPD1Q68J44 220 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 Q6ZNB5 142 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 CYP4V2Q6ZWL3 525 aaPredicted RBP10.23□□□□□ -0.77
TPM3-210ENST00000368530 RAB44Q7Z6P3 723 aaPredicted RBP10.23□□□□□ -0.77
TPM3-210ENST00000368530 CHCHD4Q8N4Q1 142 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 TSEN2Q8NCE0 465 aaKnown RBP10.23□□□□□ -0.77
TPM3-210ENST00000368530 KCTD13Q8WZ19 329 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 MRGPRX1Q96LB2 322 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 CAMK1GQ96NX5 476 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 TBCBQ99426 244 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 GTPBP2Q9BX10 602 aaKnown RBP10.23□□□□□ -0.77
TPM3-210ENST00000368530 SLC6A17Q9H1V8 727 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 NMUR1Q9HB89 426 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 DNAJC17Q9NVM6 304 aaKnown RBP10.23□□□□□ -0.77
TPM3-210ENST00000368530 HPCAL4Q9UM19 191 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 RRP9O43818 475 aaKnown RBP10.23□□□□□ -0.77
TPM3-210ENST00000368530 CST8O60676 142 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 HSF2BPO75031 334 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 ZNF217O75362 1048 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 PTPN7P35236 360 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 SCNN1AP37088 669 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 PTPN9P43378 593 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 RPL21P46778 160 aaKnown RBP10.23□□□□□ -0.77
TPM3-210ENST00000368530 VPS41P49754 854 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 PLTPP55058 493 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 HDAC4P56524 1084 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 PITX1P78337 314 aaPredicted RBP10.23□□□□□ -0.77
TPM3-210ENST00000368530 CCNG2Q16589 344 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 CA9Q16790 459 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 PREPLQ4J6C6 727 aaPredicted RBP10.23□□□□□ -0.77
TPM3-210ENST00000368530 DCAF6Q58WW2 860 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 GRAMD4Q6IC98 578 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 GSTA5Q7RTV2 222 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 PRUNE1Q86TP1 453 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 KRT222Q8N1A0 295 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 PTCD2Q8WV60 388 aaKnown RBP10.23□□□□□ -0.77
TPM3-210ENST00000368530 ZCCHC14Q8WYQ9 949 aaKnown RBP10.23□□□□□ -0.77
TPM3-210ENST00000368530 CAVIN3Q969G5 261 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 ERLEC1Q96DZ1 483 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 SNRNP25Q9BV90 132 aaKnown RBP10.23□□□□□ -0.77
TPM3-210ENST00000368530 BBS2Q9BXC9 721 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 HOMER3Q9NSC5 361 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 FAM53CQ9NYF3 392 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 SAE1Q9UBE0 346 aaPredicted RBP10.23□□□□□ -0.77
TPM3-210ENST00000368530 ASIC3Q9UHC3 531 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 DNPEPQ9ULA0 475 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 CYP8B1Q9UNU6 501 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 SCML2Q9UQR0 700 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 RAD54BQ9Y620 910 aa10.23□□□□□ -0.77
TPM3-210ENST00000368530 NEDD8-MDP1E9PL57 170 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 H0Y626 953 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 GFRA2O00451 464 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 LIASO43766 372 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 SH3BP5O60239 455 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 OPHN1O60890 802 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 TRIM16O95361 564 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 GAS8O95995 478 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 KLKB1P03952 638 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 MAOBP27338 520 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 ATP5C1P36542 298 aaKnown RBP10.22□□□□□ -0.77
TPM3-210ENST00000368530 MATKP42679 507 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 DAOAP59103 153 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 YWHAZP63104 245 aaKnown RBP10.22□□□□□ -0.77
TPM3-210ENST00000368530 SLC14A1Q13336 389 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 NNTQ13423 1086 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 ENPP2Q13822 863 aa10.22□□□□□ -0.77
TPM3-210ENST00000368530 PPP6R3Q5H9R7 873 aaPredicted RBP10.22□□□□□ -0.77
TPM3-210ENST00000368530 SYPL2Q5VXT5 272 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms