RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 NUP93Q8N1F7 819 aa9.02□□□□□ -0.96
THBS3-201ENST00000368378 NPWQ8N729 165 aa9.02□□□□□ -0.96
THBS3-201ENST00000368378 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.02□□□□□ -0.96
THBS3-201ENST00000368378 APPL2Q8NEU8 664 aa9.02□□□□□ -0.96
THBS3-201ENST00000368378 SLC35F5Q8WV83 523 aa9.02□□□□□ -0.96
THBS3-201ENST00000368378 NXNL1Q96CM4 212 aa9.02□□□□□ -0.96
THBS3-201ENST00000368378 VPS39Q96JC1 886 aa9.02□□□□□ -0.96
THBS3-201ENST00000368378 ACE2Q9BYF1 805 aaPredicted RBP9.02□□□□□ -0.96
THBS3-201ENST00000368378 RETREG1Q9H6L5 497 aa9.02□□□□□ -0.96
THBS3-201ENST00000368378 CYP3A43Q9HB55 503 aa9.02□□□□□ -0.96
THBS3-201ENST00000368378 SAC3D1A6NKF1 404 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 PFDN1O60925 122 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 KLHL2O95198 593 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 GSRP00390 522 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 HMBSP08397 361 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 IMPDH2P12268 514 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 TSHRP16473 764 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 CKMT2P17540 419 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 PIK3R1P27986 724 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 GP5P40197 560 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 SLC12A2P55011 1212 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 TNFAIP2Q03169 654 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 WASHC5Q12768 1159 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 PLA2G4EQ3MJ16 856 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 FBXO47Q5MNV8 452 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 LRRC8EQ6NSJ5 796 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 MARK2Q7KZI7 788 aaKnown RBP9.02□□□□□ -0.97
THBS3-201ENST00000368378 GPRIN1Q7Z2K8 1008 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 DSELQ8IZU8 1212 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 GALNT15Q8N3T1 639 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 GPR152Q8TDT2 470 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 PPP2R3CQ969Q6 453 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 SLC10A4Q96EP9 437 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 DCUN1D1Q96GG9 259 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 HBEGFQ99075 208 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 MPHOSPH6Q99547 160 aaKnown RBP9.02□□□□□ -0.97
THBS3-201ENST00000368378 CIB1Q99828 191 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 FERMT1Q9BQL6 677 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 MRPL1Q9BYD6 325 aaKnown RBP9.02□□□□□ -0.97
THBS3-201ENST00000368378 FBRSL1Q9HCM7 1045 aaKnown RBP9.02□□□□□ -0.97
THBS3-201ENST00000368378 TRPC7Q9HCX4 862 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 MPP6Q9NZW5 540 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 RBPJLQ9UBG7 517 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 DSEQ9UL01 958 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 CRYL1Q9Y2S2 319 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.02□□□□□ -0.97
THBS3-201ENST00000368378 BCLAF3A2AJT9 711 aaKnown RBP9.02□□□□□ -0.97
THBS3-201ENST00000368378 OR51F1A6NGY5 319 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 KPNA7A9QM74 516 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 MAGEB3O15480 346 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 TIMM44O43615 452 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 MAGEC1O60732 1142 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 GPC4O75487 556 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 CLPTM1O96005 669 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 GSTA2P09210 222 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 MCF2P10911 925 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 ATICP31939 592 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 PTPRCAPQ14761 206 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 GRIK4Q16099 956 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 MTX3Q5HYI7 312 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 SEL1L3Q68CR1 1132 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 ESRP1Q6NXG1 681 aaKnown RBP9.02□□□□□ -0.97
THBS3-201ENST00000368378 USP50Q70EL3 339 aaPredicted RBP9.02□□□□□ -0.97
THBS3-201ENST00000368378 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.02□□□□□ -0.97
THBS3-201ENST00000368378 HIC2Q96JB3 615 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 SLX1AQ9BQ83 275 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 PAAF1Q9BRP4 392 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 ZNF670Q9BS34 389 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 SPATA16Q9BXB7 569 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 SLC4A5Q9BY07 1137 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 ILKAPQ9H0C8 392 aaPredicted RBP9.02□□□□□ -0.97
THBS3-201ENST00000368378 ASB7Q9H672 318 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 SFMBT1Q9UHJ3 866 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 LZTS1Q9Y250 596 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 AP4B1Q9Y6B7 739 aa9.02□□□□□ -0.97
THBS3-201ENST00000368378 ZNF638Q14966 1978 aaKnown RBP9.01□□□□□ -0.97
THBS3-201ENST00000368378 TRDMT1O14717 391 aaKnown RBP9.01□□□□□ -0.97
THBS3-201ENST00000368378 TRIM13O60858 407 aa9.01□□□□□ -0.97
THBS3-201ENST00000368378 SNNO75324 88 aaPredicted RBP9.01□□□□□ -0.97
THBS3-201ENST00000368378 PGAM1P18669 254 aa9.01□□□□□ -0.97
THBS3-201ENST00000368378 SPRP35270 261 aaPredicted RBP9.01□□□□□ -0.97
THBS3-201ENST00000368378 PDAP1Q13442 181 aaKnown RBP9.01□□□□□ -0.97
THBS3-201ENST00000368378 FUT11Q495W5 492 aa9.01□□□□□ -0.97
THBS3-201ENST00000368378 CST9Q5W186 159 aa9.01□□□□□ -0.97
THBS3-201ENST00000368378 CHST15Q7LFX5 561 aaPredicted RBP9.01□□□□□ -0.97
THBS3-201ENST00000368378 FBXW8Q8N3Y1 598 aa9.01□□□□□ -0.97
THBS3-201ENST00000368378 TRIML2Q8N7C3 387 aa9.01□□□□□ -0.97
THBS3-201ENST00000368378 BEST2Q8NFU1 509 aa9.01□□□□□ -0.97
THBS3-201ENST00000368378 TMEM40Q8WWA1 233 aa9.01□□□□□ -0.97
THBS3-201ENST00000368378 KCNN1Q92952 543 aa9.01□□□□□ -0.97
THBS3-201ENST00000368378 ESAMQ96AP7 390 aa9.01□□□□□ -0.97
THBS3-201ENST00000368378 CYP2S1Q96SQ9 504 aa9.01□□□□□ -0.97
THBS3-201ENST00000368378 BRD8Q9H0E9 1235 aa9.01□□□□□ -0.97
THBS3-201ENST00000368378 TKTL2Q9H0I9 626 aa9.01□□□□□ -0.97
THBS3-201ENST00000368378 SOX17Q9H6I2 414 aaPredicted RBP9.01□□□□□ -0.97
THBS3-201ENST00000368378 UBAP1Q9NZ09 502 aa9.01□□□□□ -0.97
THBS3-201ENST00000368378 THEGQ9P2T0 379 aa9.01□□□□□ -0.97
THBS3-201ENST00000368378 DCDC2Q9UHG0 476 aa9.01□□□□□ -0.97
THBS3-201ENST00000368378 SSC5DA1L4H1 1573 aa9.01□□□□□ -0.97
THBS3-201ENST00000368378 MYBPHLA2RUH7 354 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms