RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 GRIA4P48058 902 aa18.39■□□□□ 0.53
UBQLN4-201ENST00000368309 IZUMO2Q6UXV1 221 aa18.39■□□□□ 0.53
UBQLN4-201ENST00000368309 TMEM151AQ8N4L1 468 aa18.39■□□□□ 0.53
UBQLN4-201ENST00000368309 KIFC1Q9BW19 673 aa18.39■□□□□ 0.53
UBQLN4-201ENST00000368309 ILKAPQ9H0C8 392 aaPredicted RBP18.39■□□□□ 0.53
UBQLN4-201ENST00000368309 MOCS2O96007 188 aaPredicted RBP18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 SBK3P0C264 359 aa18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 ITGAXP20702 1163 aa18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 EPHA3P29320 983 aa18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 ATPAF2Q8N5M1 289 aa18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 LENG8Q96PV6 779 aaPredicted RBP18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 FICDQ9BVA6 458 aa18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 CDH22Q9UJ99 828 aa18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 ITGB1P05556 798 aa18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 ODC1P11926 461 aa18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 MYL4P12829 197 aa18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 COX4I1P13073 169 aa18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 CD52P31358 61 aa18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 KLF10Q13118 480 aa18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 ARL13AQ5H913 290 aaPredicted RBP18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 ARHGAP12Q8IWW6 846 aa18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 SREK1Q8WXA9 508 aaKnown RBP18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 GPR22Q99680 433 aa18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 OMDQ99983 421 aa18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 SLC39A8Q9C0K1 460 aa18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 DMAP1Q9NPF5 467 aaPredicted RBP18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 TCF7L2Q9NQB0 619 aa18.38■□□□□ 0.53
UBQLN4-201ENST00000368309 MGEA5O60502 916 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 PAGE1O75459 146 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 IRGCQ6NXR0 463 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 FAM171BQ6P995 826 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 PNPLA1Q8N8W4 532 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 TBL1YQ9BQ87 522 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 YIPF3Q9GZM5 350 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 MPP6Q9NZW5 540 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 GIT1Q9Y2X7 761 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 KIF1CO43896 1103 aaKnown RBP18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 SLC35E2BP0CK96 405 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 TTC3P53804 2025 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 FRG1Q14331 258 aaKnown RBP18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 PKN3Q6P5Z2 889 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 METTL23Q86XA0 190 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 ACBD6Q9BR61 282 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 C1QTNF1Q9BXJ1 281 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 NUF2Q9BZD4 464 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 RHOJQ9H4E5 214 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 PIGNO95427 931 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 RPL9P32969 192 aaKnown RBP18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 PSEN1P49768 467 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 CNGA3Q16281 694 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 LINC00523Q86TU6 105 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 CEP97Q8IW35 865 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 FSTL5Q8N475 847 aaPredicted RBP18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 FCRL2Q96LA5 508 aaPredicted RBP18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 S100A14Q9HCY8 104 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 NEU3Q9UQ49 428 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 SSX2IPQ9Y2D8 614 aa18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 AAR2Q9Y312 384 aaKnown RBP18.37■□□□□ 0.53
UBQLN4-201ENST00000368309 PEX19P40855 299 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 PCID2Q5JVF3 399 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 RNF111Q6ZNA4 994 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 MFSD6LQ8IWD5 586 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 TRPV1Q8NER1 839 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 SGF29Q96ES7 293 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 TSNARE1Q96NA8 513 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 SENP6Q9GZR1 1112 aaPredicted RBP18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 OSBPL2Q9H1P3 480 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 SLC24A3Q9HC58 644 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 ZDHHC2Q9UIJ5 367 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 AIM2O14862 343 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 MAFKO60675 156 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 CHRNA4P43681 627 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 COG7P83436 770 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 TBL3Q12788 808 aaKnown RBP18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 CCNIQ14094 377 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 FSCBQ5H9T9 825 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 PPM1LQ5SGD2 360 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 TMCO4Q5TGY1 634 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 DENND5AQ6IQ26 1287 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 ACTRT2Q8TDY3 377 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 CASP10Q92851 521 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 UPF1Q92900 1129 aaKnown RBP eCLIP18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 DDX50Q9BQ39 737 aaKnown RBP18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 GLOD4Q9HC38 313 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 PADI3Q9ULW8 664 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 TMEM114B3SHH9 223 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 OR4Q2P0C623 313 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 TFEBP19484 476 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 CCNCP24863 283 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 THPOP40225 353 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 BTBD8Q5XKL5 378 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 PGM2L1Q6PCE3 622 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 CENPLQ8N0S6 344 aaPredicted RBP18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 IRGQQ8WZA9 623 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 NXNL1Q96CM4 212 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 GPAMQ9HCL2 828 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 RBM22Q9NW64 420 aaKnown RBP eCLIP18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 POMPQ9Y244 141 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 Q9Y3F1 56 aa18.36■□□□□ 0.53
UBQLN4-201ENST00000368309 MATN2O00339 956 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms