RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 IGSF6O95976 241 aa12.58□□□□□ -0.39
TPR-201ENST00000367478 ZNF37AP17032 561 aaPredicted RBP12.58□□□□□ -0.39
TPR-201ENST00000367478 MAPK9P45984 424 aa12.58□□□□□ -0.39
TPR-201ENST00000367478 MAPKAPK3Q16644 382 aa12.58□□□□□ -0.39
TPR-201ENST00000367478 SETMARQ53H47 684 aaPredicted RBP12.58□□□□□ -0.39
TPR-201ENST00000367478 TMPRSS11AQ6ZMR5 421 aa12.58□□□□□ -0.39
TPR-201ENST00000367478 C16orf86Q6ZW13 317 aa12.58□□□□□ -0.39
TPR-201ENST00000367478 RNF44Q7L0R7 432 aa12.58□□□□□ -0.39
TPR-201ENST00000367478 ARCQ7LC44 396 aa12.58□□□□□ -0.39
TPR-201ENST00000367478 REXO5Q96IC2 774 aaKnown RBP12.58□□□□□ -0.39
TPR-201ENST00000367478 MORF4L1Q9UBU8 362 aa12.58□□□□□ -0.39
TPR-201ENST00000367478 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.58□□□□□ -0.39
TPR-201ENST00000367478 TCEA3O75764 348 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 CTSHP09668 335 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 FAM228BP0C875 321 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 ATP4AP20648 1035 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 GPD2P43304 727 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 LSM12Q3MHD2 195 aaKnown RBP12.58□□□□□ -0.4
TPR-201ENST00000367478 CBWD1Q9BRT8 395 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 ACTL7BQ9Y614 415 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 UPP2O95045 317 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 VIL1P09327 827 aaKnown RBP12.58□□□□□ -0.4
TPR-201ENST00000367478 ERCC2P18074 760 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 POLD2P49005 469 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 SIX5Q8N196 739 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 ZSCAN18Q8TBC5 510 aaPredicted RBP12.58□□□□□ -0.4
TPR-201ENST00000367478 TMEM176AQ96HP8 235 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 GLT1D1Q96MS3 346 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 TARS2Q9BW92 718 aaKnown RBP12.58□□□□□ -0.4
TPR-201ENST00000367478 MUC13Q9H3R2 512 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 PNPLA8Q9NP80 782 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 C2CD2Q9Y426 696 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 RGSL1A5PLK6 1076 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 GCATO75600 419 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 CYP11B2P19099 503 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 MPZL3Q6UWV2 235 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 METTL3Q86U44 580 aaKnown RBP12.58□□□□□ -0.4
TPR-201ENST00000367478 ACMSDQ8TDX5 336 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 KAT2BQ92831 832 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 C12orf4Q9NQ89 552 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 OVOS2A0A0G2JMS6 1433 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 OVOS2A0A0J9YW53 1432 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 OVOS2Q6IE36 1432 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 FOXN3O00409 490 aaPredicted RBP12.58□□□□□ -0.4
TPR-201ENST00000367478 FOSL2P15408 326 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 CRATP43155 626 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 MYBPC1Q00872 1141 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 SREBF2Q12772 1141 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 FBXW8Q8N3Y1 598 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 PDPRQ8NCN5 879 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 CLK2P49760 499 aaKnown RBP12.58□□□□□ -0.4
TPR-201ENST00000367478 SCNN1BP51168 640 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 MRPS22P82650 360 aaKnown RBP12.58□□□□□ -0.4
TPR-201ENST00000367478 TMC3Q7Z5M5 1100 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 TMIEQ8NEW7 156 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 GPRC5AQ8NFJ5 357 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 SRP68Q9UHB9 627 aaKnown RBP12.58□□□□□ -0.4
TPR-201ENST00000367478 ADAM28Q9UKQ2 775 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 SIN3BO75182 1162 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 NR4A1P22736 598 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 S100A2P29034 98 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 DPYSQ14117 519 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 SNX32Q86XE0 403 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 PIWIL2Q8TC59 973 aaKnown RBP12.58□□□□□ -0.4
TPR-201ENST00000367478 PRCCQ92733 491 aaPredicted RBP12.58□□□□□ -0.4
TPR-201ENST00000367478 LENG9Q96B70 501 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 C12orf66Q96MD2 445 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 MRTO4Q9UKD2 239 aaKnown RBP12.58□□□□□ -0.4
TPR-201ENST00000367478 IQCF2Q8IXL9 164 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 MINDY2Q8NBR6 621 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 IGDCC4Q8TDY8 1250 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 PPP1R16AQ96I34 528 aa12.58□□□□□ -0.4
TPR-201ENST00000367478 MOV10Q9HCE1 1003 aaKnown RBP12.58□□□□□ -0.4
TPR-201ENST00000367478 TRMT13Q9NUP7 481 aaKnown RBP12.58□□□□□ -0.4
TPR-201ENST00000367478 UXTQ9UBK9 157 aaPredicted RBP12.58□□□□□ -0.4
TPR-201ENST00000367478 CYP2R1Q6VVX0 501 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 NKAPQ8N5F7 415 aaKnown RBP12.57□□□□□ -0.4
TPR-201ENST00000367478 HTR3CQ8WXA8 447 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 NELL1Q92832 810 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 DHRS7Q9Y394 339 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 GRIP1Q9Y3R0 1128 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 CBX4O00257 560 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 MAGEC1O60732 1142 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 ENTPD3O75355 529 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 DLG1Q12959 904 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 PDK3Q15120 406 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 TOMM20Q15388 145 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 ENGASEQ8NFI3 743 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 ATG4AQ8WYN0 398 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 LMAN2LQ9H0V9 348 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 ARL15Q9NXU5 204 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 MLXQ9UH92 298 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 PPIEQ9UNP9 301 aaKnown RBP12.57□□□□□ -0.4
TPR-201ENST00000367478 MAPTP10636 758 aaKnown RBP12.57□□□□□ -0.4
TPR-201ENST00000367478 CDK9P50750 372 aaKnown RBP12.57□□□□□ -0.4
TPR-201ENST00000367478 RAB15P59190 212 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 ZNF280DQ6N043 979 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 SPAG16Q8N0X2 631 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 ACTL9Q8TC94 416 aa12.57□□□□□ -0.4
TPR-201ENST00000367478 SERPINB11Q96P15 392 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms