RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 VPS26BQ4G0F5 336 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF347Q96SE7 839 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 AHSPQ9NZD4 102 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 GLI1P08151 1106 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 AKT1P31749 480 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PITPNAQ00169 270 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 NUDT18Q6ZVK8 323 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 MTMR9Q96QG7 549 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 TMOD3Q9NYL9 352 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 TRIP10Q15642 601 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 WDR72Q3MJ13 1102 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PAOXQ6QHF9 649 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 C3orf62Q6ZUJ4 267 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 CREB3L2Q70SY1 520 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 LRFN5Q96NI6 719 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 WDR24Q96S15 920 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SENP6Q9GZR1 1112 aaPredicted RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SH3D21A4FU49 640 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 FAM196BA6NMK8 535 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PLIN5Q00G26 463 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ZMAT1Q5H9K5 638 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 NLRP8Q86W28 1048 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF34Q8IZ26 560 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 LNX2Q8N448 690 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PJA1Q8NG27 643 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 CENPNQ96H22 339 aaPredicted RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF670Q9BS34 389 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SLC39A2Q9NP94 309 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 C12orf4Q9NQ89 552 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PRORSD1PA6NEY8 169 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SMAD6O43541 496 aaKnown RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 CD2P06729 351 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 KCNJ2P63252 427 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SREBF2Q12772 1141 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ACOX1Q15067 660 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 LRRC17Q8N6Y2 441 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 KLHL21Q9UJP4 597 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PSME2Q9UL46 239 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 BET1O15155 118 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 H6PDO95479 791 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PRKAR1AP10644 381 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 CYP3A5P20815 502 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 RBM48Q5RL73 367 aaKnown RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 FGD2Q7Z6J4 655 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ZBTB46Q86UZ6 589 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ATP6V0D2Q8N8Y2 350 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ANKFN1Q8N957 763 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 NUDT12Q9BQG2 462 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 RIOK2Q9BVS4 552 aaKnown RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 CEP41Q9BYV8 373 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 TAF6LQ9Y6J9 622 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 DCAF17Q5H9S7 520 aaPredicted RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 REXO1L1PQ8IX06 675 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF565Q8N9K5 539 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 AKAP1Q92667 903 aaKnown RBP eCLIP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ARHGAP28Q9P2N2 729 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 DNAJC16Q9Y2G8 782 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SCNN1BP51168 640 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 EMC2Q15006 297 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 AGAP11Q8TF27 550 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 IL22Q9GZX6 179 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ERGIC3Q9Y282 383 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 RASGRP1O95267 797 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 AGMOQ6ZNB7 445 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 FEM1AQ9BSK4 669 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PCIF1Q9H4Z3 704 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 RPH3AQ9Y2J0 694 aaPredicted RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 H0Y858 1186 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ANXA9O76027 345 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 KDM4BO94953 1096 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ETV4P43268 484 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 KCNJ5P48544 419 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TMEM214Q6NUQ4 689 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CTPS2Q9NRF8 586 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 HSD17B2P37059 387 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 RPS5P46782 204 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CLEC16AQ2KHT3 1053 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF772Q68DY9 489 aaPredicted RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PIK3AP1Q6ZUJ8 805 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TSPAN14Q8NG11 270 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CAMK1GQ96NX5 476 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CAMKK2Q96RR4 588 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF696Q9H7X3 374 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ZDHHC7Q9NXF8 308 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SAMHD1Q9Y3Z3 626 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 GSTT2P0CG29 244 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TGFB3P10600 412 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ACADMP11310 421 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 DPEP1P16444 411 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ASMTP46597 345 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 FMR1Q06787 632 aaKnown RBP eCLIP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 UAP1L1Q3KQV9 507 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 FAM182BQ5T319 152 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ZSWIM1Q9BR11 485 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 AMNQ9BXJ7 453 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 DLGAP2Q9P1A6 1054 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 HMGCRP04035 888 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 OAZ1P54368 228 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 KCNT1Q5JUK3 1230 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TBC1D16Q8TBP0 767 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms