RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 IGLV3-27P01718 113 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 PRKCHP24723 683 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 MIPP30301 263 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 MAN1A1P33908 653 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 SGSHP51688 502 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 PIGHQ14442 188 aaPredicted RBP8.41□□□□□ -1.06
MRPL55-211ENST00000366738 ZNF234Q14588 700 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 TRIP4Q15650 581 aaPredicted RBP8.41□□□□□ -1.06
MRPL55-211ENST00000366738 PTPRNQ16849 979 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 KIF19Q2TAC6 998 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 PREPLQ4J6C6 727 aaPredicted RBP8.41□□□□□ -1.06
MRPL55-211ENST00000366738 ZC3H12AQ5D1E8 599 aaKnown RBP8.41□□□□□ -1.06
MRPL55-211ENST00000366738 SDE2Q6IQ49 451 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 LAYNQ6UX15 382 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 DBX2Q6ZNG2 339 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 LRRC69Q6ZNQ3 347 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 STRADAQ7RTN6 431 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 DAAM2Q86T65 1068 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 TADA2BQ86TJ2 420 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 SLC35F6Q8N357 371 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 KRT35Q92764 455 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 NXPE2Q96DL1 559 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 SLC39A13Q96H72 371 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 CDK5RAP1Q96SZ6 601 aaKnown RBP8.41□□□□□ -1.06
MRPL55-211ENST00000366738 GPATCH2LQ9NWQ4 482 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 WSB2Q9NYS7 404 aaPredicted RBP8.41□□□□□ -1.06
MRPL55-211ENST00000366738 USP36Q9P275 1121 aaKnown RBP8.41□□□□□ -1.06
MRPL55-211ENST00000366738 THAP10Q9P2Z0 257 aaPredicted RBP8.41□□□□□ -1.06
MRPL55-211ENST00000366738 PCSK1NQ9UHG2 260 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 TLR6Q9Y2C9 796 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 PCDHGB2Q9Y5G2 931 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 SNX10Q9Y5X0 201 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 ALG6Q9Y672 507 aa8.41□□□□□ -1.06
MRPL55-211ENST00000366738 KCNK3O14649 394 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 TNFSF14O43557 240 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 SPOPO43791 374 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 TSPAN3O60637 253 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 MOCS2O96007 188 aaPredicted RBP8.4□□□□□ -1.06
MRPL55-211ENST00000366738 TNNT1P13805 278 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 HOXD9P28356 352 aaPredicted RBP8.4□□□□□ -1.06
MRPL55-211ENST00000366738 HLA-FP30511 346 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 PCK1P35558 622 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 CSNK1EP49674 416 aaKnown RBP8.4□□□□□ -1.06
MRPL55-211ENST00000366738 CXCR3P49682 368 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 DNA2P51530 1060 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 TPMTP51580 245 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 TBX4P57082 545 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 COG7P83436 770 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 IL9RQ01113 521 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 NNTQ13423 1086 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 CA9Q16790 459 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 ATP13A4Q4VNC1 1196 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 KCNT1Q5JUK3 1230 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 ARTNQ5T4W7 220 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 NADSYN1Q6IA69 706 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 SCYL2Q6P3W7 929 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 IL27RAQ6UWB1 636 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 NUDT18Q6ZVK8 323 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 SLFN11Q7Z7L1 901 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 METTL3Q86U44 580 aaKnown RBP8.4□□□□□ -1.06
MRPL55-211ENST00000366738 NT5DC3Q86UY8 548 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 ZSCAN30Q86W11 494 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 PYROXD2Q8N2H3 581 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 CPXM2Q8N436 756 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 RNF10Q8N5U6 811 aaKnown RBP8.4□□□□□ -1.06
MRPL55-211ENST00000366738 ZNF366Q8N895 744 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 LSM14AQ8ND56 463 aaKnown RBP8.4□□□□□ -1.06
MRPL55-211ENST00000366738 WFDC5Q8TCV5 224 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 SNX19Q92543 992 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 MYEOVQ96EZ4 313 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 WDR24Q96S15 920 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 SNRNP25Q9BV90 132 aaKnown RBP8.4□□□□□ -1.06
MRPL55-211ENST00000366738 TKTL2Q9H0I9 626 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 ZWILCHQ9H900 591 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 ITM2CQ9NQX7 267 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 ELOVL2Q9NXB9 296 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 ARHGEF38Q9NXL2 777 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 RRN3Q9NYV6 651 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 SNX11Q9Y5W9 270 aa8.4□□□□□ -1.06
MRPL55-211ENST00000366738 COL5A1P20908 1838 aaPredicted RBP8.4□□□□□ -1.07
MRPL55-211ENST00000366738 SPTAN1Q13813 2472 aaKnown RBP8.4□□□□□ -1.07
MRPL55-211ENST00000366738 CKAP5Q14008 2032 aa8.39□□□□□ -1.07
MRPL55-211ENST00000366738 MYO9AB2RTY4 2548 aa8.39□□□□□ -1.07
MRPL55-211ENST00000366738 TLN1Q9Y490 2541 aaKnown RBP8.39□□□□□ -1.07
MRPL55-211ENST00000366738 GOLGA6L7A0A1B0GV03 622 aa8.39□□□□□ -1.07
MRPL55-211ENST00000366738 GOLGA6L9A6NEM1 432 aa8.39□□□□□ -1.07
MRPL55-211ENST00000366738 METTL12A8MUP2 240 aa8.39□□□□□ -1.07
MRPL55-211ENST00000366738 KCNU1A8MYU2 1149 aa8.39□□□□□ -1.07
MRPL55-211ENST00000366738 E9PAM4 449 aa8.39□□□□□ -1.07
MRPL55-211ENST00000366738 CBX4O00257 560 aa8.39□□□□□ -1.07
MRPL55-211ENST00000366738 ENC1O14682 589 aa8.39□□□□□ -1.07
MRPL55-211ENST00000366738 DDX3YO15523 660 aaKnown RBP8.39□□□□□ -1.07
MRPL55-211ENST00000366738 RNF8O76064 485 aa8.39□□□□□ -1.07
MRPL55-211ENST00000366738 IGLV3-19P01714 112 aa8.39□□□□□ -1.07
MRPL55-211ENST00000366738 CHKAP35790 457 aa8.39□□□□□ -1.07
MRPL55-211ENST00000366738 GRK6P43250 576 aa8.39□□□□□ -1.07
MRPL55-211ENST00000366738 SSR1P43307 286 aaKnown RBP8.39□□□□□ -1.07
MRPL55-211ENST00000366738 CXADRP78310 365 aa8.39□□□□□ -1.07
MRPL55-211ENST00000366738 SUZ12Q15022 739 aaKnown RBP8.39□□□□□ -1.07
MRPL55-211ENST00000366738 ZNF569Q5MCW4 686 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms