RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 FBXL19Q6PCT2 694 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 CIR1Q86X95 450 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-209ENST00000366735 FAM174AQ8TBP5 190 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 FRS2Q8WU20 508 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 KLHDC7BQ96G42 594 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 PPP1R16AQ96I34 528 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 SLC2A13Q96QE2 648 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 C2orf49Q9BVC5 232 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-209ENST00000366735 NDST4Q9H3R1 872 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 VANGL2Q9ULK5 521 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 STAP1Q9ULZ2 295 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 CLCA2Q9UQC9 943 aa12.72□□□□□ -0.37
MRPL55-209ENST00000366735 TK2O00142 265 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 CBX4O00257 560 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 BNIP3LO60238 219 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 DAB1O75553 588 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 PRNPP04156 253 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 RHOCP08134 193 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 VAV1P15498 845 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 GLDCP23378 1020 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 AKT2P31751 481 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 EIF2S3P41091 472 aaKnown RBP12.71□□□□□ -0.37
MRPL55-209ENST00000366735 RECQLP46063 649 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-209ENST00000366735 CDH4P55283 916 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 PTK2Q05397 1052 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 CNTN1Q12860 1018 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 NME3Q13232 169 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 AUHQ13825 339 aaKnown RBP12.71□□□□□ -0.37
MRPL55-209ENST00000366735 DLG2Q15700 870 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 QPCTQ16769 361 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 FIGNQ5HY92 759 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 FKBP15Q5T1M5 1219 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 FBXL22Q6P050 247 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 TRIM65Q6PJ69 517 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 Q6ZVU0 165 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 ZDHHC17Q8IUH5 632 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 CREBRFQ8IUR6 639 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 DEFB106AQ8N104 65 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 SH2D3CQ8N5H7 860 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 SNIP1Q8TAD8 396 aaKnown RBP12.71□□□□□ -0.37
MRPL55-209ENST00000366735 RFFLQ8WZ73 363 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 PPP1R13BQ96KQ4 1090 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 FEM1AQ9BSK4 669 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 APEX2Q9UBZ4 518 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 PPM1HQ9ULR3 514 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 PCDHGC3Q9UN70 934 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 HS3ST2Q9Y278 367 aa12.71□□□□□ -0.37
MRPL55-209ENST00000366735 IGSF10Q6WRI0 2623 aa12.71□□□□□ -0.38
MRPL55-209ENST00000366735 CHD5Q8TDI0 1954 aa12.7□□□□□ -0.38
MRPL55-209ENST00000366735 KPNA3O00505 521 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-209ENST00000366735 WNT9AO14904 365 aa12.7□□□□□ -0.38
MRPL55-209ENST00000366735 ATMINO43313 823 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-209ENST00000366735 THEGLP0DJG4 465 aa12.7□□□□□ -0.38
MRPL55-209ENST00000366735 NOS2P35228 1153 aa12.7□□□□□ -0.38
MRPL55-209ENST00000366735 CLCN6P51797 869 aa12.7□□□□□ -0.38
MRPL55-209ENST00000366735 CENPCQ03188 943 aa12.7□□□□□ -0.38
MRPL55-209ENST00000366735 C19orf57Q0VDD7 668 aa12.7□□□□□ -0.38
MRPL55-209ENST00000366735 BNIP3Q12983 259 aa12.7□□□□□ -0.38
MRPL55-209ENST00000366735 ZNF211Q13398 564 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-209ENST00000366735 EIF4EBP2Q13542 120 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-209ENST00000366735 ARHGAP44Q17R89 818 aa12.7□□□□□ -0.38
MRPL55-209ENST00000366735 BRMS1LQ5PSV4 323 aa12.7□□□□□ -0.38
MRPL55-209ENST00000366735 OR6B2Q6IFH4 312 aa12.7□□□□□ -0.38
MRPL55-209ENST00000366735 LRRC31Q6UY01 552 aa12.7□□□□□ -0.38
MRPL55-209ENST00000366735 GBP6Q6ZN66 633 aa12.7□□□□□ -0.38
MRPL55-209ENST00000366735 SPATS2Q86XZ4 545 aaKnown RBP12.7□□□□□ -0.38
MRPL55-209ENST00000366735 ATP11CQ8NB49 1132 aa12.7□□□□□ -0.38
MRPL55-209ENST00000366735 LSM14AQ8ND56 463 aaKnown RBP12.7□□□□□ -0.38
MRPL55-209ENST00000366735 CCDC112Q8NEF3 446 aa12.7□□□□□ -0.38
MRPL55-209ENST00000366735 ARHGAP20Q9P2F6 1191 aa12.7□□□□□ -0.38
MRPL55-209ENST00000366735 NEMP2A6NFY4 417 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 AKR1B15C9JRZ8 316 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-209ENST00000366735 M0QYT0 321 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 SDC3O75056 442 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 GYPCP04921 128 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 TPM1P09493 284 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 HNRNPA2B1P22626 353 aaKnown RBP12.69□□□□□ -0.38
MRPL55-209ENST00000366735 KRT9P35527 623 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 NUMBP49757 651 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 DUSP3P51452 185 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-209ENST00000366735 PITX1P78337 314 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-209ENST00000366735 CCZ1BP86790 482 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 CCZ1P86791 482 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-209ENST00000366735 SYCP1Q15431 976 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 EXOC3L4Q17RC7 722 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 PROX2Q3B8N5 592 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 POM121L1PQ3SYA9 428 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 FAM183BPQ6ZVS7 135 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 SLC26A9Q7LBE3 791 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 KANSL1Q7Z3B3 1105 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 SETD3Q86TU7 594 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-209ENST00000366735 DCP2Q8IU60 420 aaKnown RBP12.69□□□□□ -0.38
MRPL55-209ENST00000366735 PASD1Q8IV76 773 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 CNGA4Q8IV77 575 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 TC2NQ8N9U0 490 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 DCAF4L2Q8NA75 395 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 MSANTD4Q8NCY6 345 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 C1orf131Q8NDD1 294 aaKnown RBP12.69□□□□□ -0.38
MRPL55-209ENST00000366735 TMIEQ8NEW7 156 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 OR4C6Q8NH72 309 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms