RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 NOL3O60936 208 aaKnown RBP19.95■□□□□ 0.78
TRIM58-201ENST00000366481 COL6A2P12110 1019 aa19.95■□□□□ 0.78
TRIM58-201ENST00000366481 CKMT2P17540 419 aa19.95■□□□□ 0.78
TRIM58-201ENST00000366481 PHEXP78562 749 aa19.95■□□□□ 0.78
TRIM58-201ENST00000366481 BORAQ6PGQ7 559 aa19.95■□□□□ 0.78
TRIM58-201ENST00000366481 ARMCX2Q7L311 632 aa19.95■□□□□ 0.78
TRIM58-201ENST00000366481 FBXL8Q96CD0 374 aa19.95■□□□□ 0.78
TRIM58-201ENST00000366481 VPS50Q96JG6 964 aa19.95■□□□□ 0.78
TRIM58-201ENST00000366481 NXF3Q9H4D5 531 aaKnown RBP19.95■□□□□ 0.78
TRIM58-201ENST00000366481 TRIM17Q9Y577 477 aa19.95■□□□□ 0.78
TRIM58-201ENST00000366481 DOCK1Q14185 1865 aa19.95■□□□□ 0.78
TRIM58-201ENST00000366481 SAC3D1A6NKF1 404 aa19.95■□□□□ 0.78
TRIM58-201ENST00000366481 CHRNGP07510 517 aa19.95■□□□□ 0.78
TRIM58-201ENST00000366481 CCR10P46092 362 aa19.95■□□□□ 0.78
TRIM58-201ENST00000366481 OXCT1P55809 520 aa19.95■□□□□ 0.78
TRIM58-201ENST00000366481 DCAF6Q58WW2 860 aa19.95■□□□□ 0.78
TRIM58-201ENST00000366481 DQX1Q8TE96 717 aaKnown RBP19.95■□□□□ 0.78
TRIM58-201ENST00000366481 CYP3A43Q9HB55 503 aa19.95■□□□□ 0.78
TRIM58-201ENST00000366481 CROCCQ5TZA2 2017 aa19.94■□□□□ 0.78
TRIM58-201ENST00000366481 MFSD11O43934 449 aa19.94■□□□□ 0.78
TRIM58-201ENST00000366481 GARSP41250 739 aaKnown RBP19.94■□□□□ 0.78
TRIM58-201ENST00000366481 NDUFV1P49821 464 aa19.94■□□□□ 0.78
TRIM58-201ENST00000366481 PDK2Q15119 407 aa19.94■□□□□ 0.78
TRIM58-201ENST00000366481 DLG2Q15700 870 aa19.94■□□□□ 0.78
TRIM58-201ENST00000366481 ZNF423Q2M1K9 1284 aa19.94■□□□□ 0.78
TRIM58-201ENST00000366481 COLGALT1Q8NBJ5 622 aa19.94■□□□□ 0.78
TRIM58-201ENST00000366481 SLC2A14Q8TDB8 520 aa19.94■□□□□ 0.78
TRIM58-201ENST00000366481 OSMRQ99650 979 aa19.94■□□□□ 0.78
TRIM58-201ENST00000366481 MTMR10Q9NXD2 777 aa19.94■□□□□ 0.78
TRIM58-201ENST00000366481 GSRP00390 522 aa19.94■□□□□ 0.78
TRIM58-201ENST00000366481 PSMB4P28070 264 aa19.94■□□□□ 0.78
TRIM58-201ENST00000366481 LSM12Q3MHD2 195 aaKnown RBP19.94■□□□□ 0.78
TRIM58-201ENST00000366481 SEL1L3Q68CR1 1132 aa19.94■□□□□ 0.78
TRIM58-201ENST00000366481 SLC35F5Q8WV83 523 aa19.94■□□□□ 0.78
TRIM58-201ENST00000366481 CAB39LQ9H9S4 337 aa19.94■□□□□ 0.78
TRIM58-201ENST00000366481 CLK4Q9HAZ1 481 aaKnown RBP19.94■□□□□ 0.78
TRIM58-201ENST00000366481 MKS1Q9NXB0 559 aa19.94■□□□□ 0.78
TRIM58-201ENST00000366481 UBP1Q9NZI7 540 aa19.94■□□□□ 0.78
TRIM58-201ENST00000366481 GLRBP48167 497 aa19.93■□□□□ 0.78
TRIM58-201ENST00000366481 CCNYL1Q8N7R7 359 aa19.93■□□□□ 0.78
TRIM58-201ENST00000366481 ISOC1Q96CN7 298 aa19.93■□□□□ 0.78
TRIM58-201ENST00000366481 ASB7Q9H672 318 aa19.93■□□□□ 0.78
TRIM58-201ENST00000366481 PNPLA3Q9NST1 481 aa19.93■□□□□ 0.78
TRIM58-201ENST00000366481 AURKCQ9UQB9 309 aa19.93■□□□□ 0.78
TRIM58-201ENST00000366481 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.93■□□□□ 0.78
TRIM58-201ENST00000366481 GAS2O43903 313 aaKnown RBP19.93■□□□□ 0.78
TRIM58-201ENST00000366481 E2F6O75461 281 aa19.93■□□□□ 0.78
TRIM58-201ENST00000366481 TGM2P21980 687 aa19.93■□□□□ 0.78
TRIM58-201ENST00000366481 CNTFP26441 200 aa19.93■□□□□ 0.78
TRIM58-201ENST00000366481 RALGDSQ12967 914 aa19.93■□□□□ 0.78
TRIM58-201ENST00000366481 EPGNQ6UW88 154 aa19.93■□□□□ 0.78
TRIM58-201ENST00000366481 KCNN1Q92952 543 aa19.93■□□□□ 0.78
TRIM58-201ENST00000366481 LRRC39Q96DD0 335 aa19.93■□□□□ 0.78
TRIM58-201ENST00000366481 VAPBO95292 243 aa19.93■□□□□ 0.78
TRIM58-201ENST00000366481 LRRC8EQ6NSJ5 796 aa19.93■□□□□ 0.78
TRIM58-201ENST00000366481 GPATCH1Q9BRR8 931 aaKnown RBP19.93■□□□□ 0.78
TRIM58-201ENST00000366481 SYBUQ9NX95 663 aa19.93■□□□□ 0.78
TRIM58-201ENST00000366481 RBMX2Q9Y388 322 aaKnown RBP19.93■□□□□ 0.78
TRIM58-201ENST00000366481 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.92■□□□□ 0.78
TRIM58-201ENST00000366481 RNF103-CHMP3A0A140T963 221 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 A0A1W2PPW3 197 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 BCLAF3A2AJT9 711 aaKnown RBP19.92■□□□□ 0.78
TRIM58-201ENST00000366481 TMEM247A6NEH6 219 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 KPNA7A9QM74 516 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 HOXD12P35452 270 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 TNFAIP2Q03169 654 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 ARHGAP1Q07960 439 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 PDCD4Q53EL6 469 aaKnown RBP19.92■□□□□ 0.78
TRIM58-201ENST00000366481 PIGGQ5H8A4 983 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 NCBP2-AS2Q69YL0 99 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 TMEM53Q6P2H8 277 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 NAPRTQ6XQN6 538 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 HTR3CQ8WXA8 447 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 DLG3Q92796 817 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 CCDC97Q96F63 343 aaPredicted RBP19.92■□□□□ 0.78
TRIM58-201ENST00000366481 SLC29A1Q99808 456 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 OSBPL11Q9BXB4 747 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 ATICP31939 592 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 PPARGP37231 505 aaPredicted RBP19.92■□□□□ 0.78
TRIM58-201ENST00000366481 GJA8P48165 433 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 INCA1Q0VD86 236 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 BNIP3Q12983 259 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 ITGADQ13349 1161 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 STILQ15468 1287 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 CATSPER4Q7RTX7 472 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 CDKL3Q8IVW4 592 aaPredicted RBP19.92■□□□□ 0.78
TRIM58-201ENST00000366481 DEFB106AQ8N104 65 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 PLD6Q8N2A8 252 aaKnown RBP19.92■□□□□ 0.78
TRIM58-201ENST00000366481 RP9Q8TA86 221 aaKnown RBP19.92■□□□□ 0.78
TRIM58-201ENST00000366481 CYGBQ8WWM9 190 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 RSPH1Q8WYR4 309 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 TSNARE1Q96NA8 513 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 TSPYL2Q9H2G4 693 aaPredicted RBP19.92■□□□□ 0.78
TRIM58-201ENST00000366481 RNF39Q9H2S5 420 aa19.92■□□□□ 0.78
TRIM58-201ENST00000366481 FUOMA2VDF0 154 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 K7EPI3 171 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 RNF103O00237 685 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 PLOD2O00469 737 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 SPTLC1O15269 473 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 TPH1P17752 444 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms