RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ABCB8Q9NUT2 735 aa21.04■□□□□ 0.96
SHISA4-201ENST00000362011 KLHL8Q9P2G9 620 aaPredicted RBP21.04■□□□□ 0.96
SHISA4-201ENST00000362011 GGA2Q9UJY4 613 aa21.04■□□□□ 0.96
SHISA4-201ENST00000362011 FBXO10Q9UK96 956 aa21.04■□□□□ 0.96
SHISA4-201ENST00000362011 CBX4O00257 560 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 OPHN1O60890 802 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 PABPC1P11940 636 aaKnown RBP21.03■□□□□ 0.96
SHISA4-201ENST00000362011 AOC1P19801 751 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 HLA-FP30511 346 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 ADCY8P40145 1251 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 NUMBP49757 651 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 GPS1Q13098 491 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 ZBTB17Q13105 803 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 TDGQ13569 410 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 HNRNPDQ14103 355 aaKnown RBP21.03■□□□□ 0.96
SHISA4-201ENST00000362011 DMC1Q14565 340 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 PLEKHG6Q3KR16 790 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 TEX44Q53QW1 395 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 TMCO4Q5TGY1 634 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 ARHGEF18Q6ZSZ5 1173 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 PID1Q7Z2X4 250 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 IFT20Q8IY31 132 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 APCDD1Q8J025 514 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 ZNF567Q8N184 647 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.03■□□□□ 0.96
SHISA4-201ENST00000362011 USP33Q8TEY7 942 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 SNF8Q96H20 258 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 HINFPQ9BQA5 517 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 CEP41Q9BYV8 373 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 BRD9Q9H8M2 597 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 FAM114A2Q9NRY5 505 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 DNAJC17Q9NVM6 304 aaKnown RBP21.03■□□□□ 0.96
SHISA4-201ENST00000362011 UBA2Q9UBT2 640 aaPredicted RBP21.03■□□□□ 0.96
SHISA4-201ENST00000362011 TRHDEQ9UKU6 1024 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 DUSP12Q9UNI6 340 aa21.03■□□□□ 0.96
SHISA4-201ENST00000362011 UQCRHLA0A096LP55 91 aa21.02■□□□□ 0.95
SHISA4-201ENST00000362011 PEX11BO96011 259 aa21.02■□□□□ 0.95
SHISA4-201ENST00000362011 JCHAINP01591 159 aa21.02■□□□□ 0.95
SHISA4-201ENST00000362011 UQCRHP07919 91 aa21.02■□□□□ 0.95
SHISA4-201ENST00000362011 GLDCP23378 1020 aa21.02■□□□□ 0.95
SHISA4-201ENST00000362011 RPL21P46778 160 aaKnown RBP21.02■□□□□ 0.95
SHISA4-201ENST00000362011 DGKGP49619 791 aa21.02■□□□□ 0.95
SHISA4-201ENST00000362011 RENBPP51606 427 aa21.02■□□□□ 0.95
SHISA4-201ENST00000362011 TERF1P54274 439 aa21.02■□□□□ 0.95
SHISA4-201ENST00000362011 GAB4Q2WGN9 574 aa21.02■□□□□ 0.95
SHISA4-201ENST00000362011 ITPRIPL2Q3MIP1 535 aa21.02■□□□□ 0.95
SHISA4-201ENST00000362011 PITRM1Q5JRX3 1037 aa21.02■□□□□ 0.95
SHISA4-201ENST00000362011 ETFBKMTQ8IXQ9 262 aa21.02■□□□□ 0.95
SHISA4-201ENST00000362011 SEC14L1Q92503 715 aa21.02■□□□□ 0.95
SHISA4-201ENST00000362011 C2orf49Q9BVC5 232 aaPredicted RBP21.02■□□□□ 0.95
SHISA4-201ENST00000362011 MFSD1Q9H3U5 465 aa21.02■□□□□ 0.95
SHISA4-201ENST00000362011 KCNK12Q9HB15 430 aa21.02■□□□□ 0.95
SHISA4-201ENST00000362011 GDF3Q9NR23 364 aa21.02■□□□□ 0.95
SHISA4-201ENST00000362011 INTS6Q9UL03 887 aaKnown RBP21.02■□□□□ 0.95
SHISA4-201ENST00000362011 SNX24Q9Y343 169 aa21.02■□□□□ 0.95
SHISA4-201ENST00000362011 VPS13AQ96RL7 3174 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 PTPRZ1P23471 2315 aaPredicted RBP21.01■□□□□ 0.95
SHISA4-201ENST00000362011 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.01■□□□□ 0.95
SHISA4-201ENST00000362011 DNALI1O14645 258 aaPredicted RBP21.01■□□□□ 0.95
SHISA4-201ENST00000362011 NDC80O14777 642 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 PI15O43692 258 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 SNAP91O60641 907 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 ZMPSTE24O75844 475 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 MCM3P25205 808 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 DRG2P55039 364 aaKnown RBP21.01■□□□□ 0.95
SHISA4-201ENST00000362011 ARF5P84085 180 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 RFTN1Q14699 578 aaPredicted RBP21.01■□□□□ 0.95
SHISA4-201ENST00000362011 LBRQ14739 615 aaKnown RBP21.01■□□□□ 0.95
SHISA4-201ENST00000362011 MARC1Q5VT66 337 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 ITPRIPL1Q6GPH6 555 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 KIAA0907Q7Z7F0 614 aaPredicted RBP21.01■□□□□ 0.95
SHISA4-201ENST00000362011 AHI1Q8N157 1196 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 BBS5Q8N3I7 341 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 BBOF1Q8ND07 529 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 WFIKKN2Q8TEU8 576 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 CASKIN2Q8WXE0 1202 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 ACDQ96AP0 544 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 TEKT5Q96M29 485 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 PNKPQ96T60 521 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 RBM22Q9NW64 420 aaKnown RBP eCLIP21.01■□□□□ 0.95
SHISA4-201ENST00000362011 GTSE1Q9NYZ3 720 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 WHRNQ9P202 907 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 IGSF9Q9P2J2 1179 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 VPS51Q9UID3 782 aa21.01■□□□□ 0.95
SHISA4-201ENST00000362011 MUC22E2RYF6 1773 aaPredicted RBP21.01■□□□□ 0.95
SHISA4-201ENST00000362011 RIF1Q5UIP0 2472 aaKnown RBP21■□□□□ 0.95
SHISA4-201ENST00000362011 ESYT3A0FGR9 886 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 OTOL1A6NHN0 477 aaPredicted RBP21■□□□□ 0.95
SHISA4-201ENST00000362011 ARNTLO00327 626 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 ZBTB24O43167 697 aaPredicted RBP21■□□□□ 0.95
SHISA4-201ENST00000362011 TULP3O75386 442 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 TUBBP07437 444 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 IVDP26440 423 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 FDFT1P37268 417 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 MMP13P45452 471 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 GEMIN4P57678 1058 aaKnown RBP21■□□□□ 0.95
SHISA4-201ENST00000362011 SLC10A7Q0GE19 358 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 CALCOCO2Q13137 446 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 FUT11Q495W5 492 aa21■□□□□ 0.95
SHISA4-201ENST00000362011 FAM182AQ5T1J6 154 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms