RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 KCNK16Q96T55 309 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 DDX50Q9BQ39 737 aaKnown RBP12.63□□□□□ -0.39
UBA3-202ENST00000361055 PRDM12Q9H4Q4 367 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 EBF3Q9H4W6 596 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 COG4Q9H9E3 785 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 GDAP2Q9NXN4 497 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 TBC1D30Q9Y2I9 924 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 RAD54BQ9Y620 910 aa12.63□□□□□ -0.39
UBA3-202ENST00000361055 CCDC85CA6NKD9 419 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 KPNA7A9QM74 516 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 XPO1O14980 1071 aaKnown RBP12.62□□□□□ -0.39
UBA3-202ENST00000361055 BAIAP3O94812 1187 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 SNUPNO95149 360 aaKnown RBP12.62□□□□□ -0.39
UBA3-202ENST00000361055 RPL9P32969 192 aaKnown RBP12.62□□□□□ -0.39
UBA3-202ENST00000361055 NOS2P35228 1153 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 SULT1E1P49888 294 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 ERFP50548 548 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 LIMK2P53671 638 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 EPHB1P54762 984 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 MTTPP55157 894 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 FPGSQ05932 587 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 KLF10Q13118 480 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 TUSC3Q13454 348 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 MED21Q13503 144 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 BSPRYQ5W0U4 402 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.62□□□□□ -0.39
UBA3-202ENST00000361055 PDZD4Q76G19 769 aaPredicted RBP12.62□□□□□ -0.39
UBA3-202ENST00000361055 LIMS2Q7Z4I7 341 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 KBTBD6Q86V97 674 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 PIP4K2CQ8TBX8 421 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 KBTBD7Q8WVZ9 684 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 BADQ92934 168 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 SNX25Q9H3E2 840 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 BFARQ9NZS9 450 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 ADAMTS6Q9UKP5 1117 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 LOC100653049A0A140TA62 436 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 F5H423 210 aaPredicted RBP12.62□□□□□ -0.39
UBA3-202ENST00000361055 G3V2L1 256 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 TRIM13O60858 407 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 RNASEH1O60930 286 aaKnown RBP12.62□□□□□ -0.39
UBA3-202ENST00000361055 DAB1O75553 588 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 KRT34O76011 436 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 ACRP10323 421 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 THRAP10827 490 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 VCLP18206 1134 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 GLDCP23378 1020 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 LMO2P25791 158 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 POLE2P56282 527 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 CFAP157Q5JU67 520 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 VWA5B1Q5TIE3 1220 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 FSTL4Q6MZW2 842 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 FRMD7Q6ZUT3 714 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 CLEC14AQ86T13 490 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 PHTF2Q8N3S3 785 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.62□□□□□ -0.39
UBA3-202ENST00000361055 SHKBP1Q8TBC3 707 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 GDPD5Q8WTR4 605 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 AZIN2Q96A70 460 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 UROC1Q96N76 676 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 NPY6RQ99463 290 aa12.62□□□□□ -0.39
UBA3-202ENST00000361055 PIH1D1Q9NWS0 290 aaKnown RBP12.62□□□□□ -0.39
UBA3-202ENST00000361055 ERI2A8K979 691 aaKnown RBP12.61□□□□□ -0.39
UBA3-202ENST00000361055 DCXO43602 365 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 HSPA4LO95757 839 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 AP2A1O95782 977 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 AMHP03971 560 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 HADHAP40939 763 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 NPY2RP49146 381 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 TAF6P49848 677 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 CLCNKBP51801 687 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 HK2P52789 917 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 PRKAA2P54646 552 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 TBL3Q12788 808 aaKnown RBP12.61□□□□□ -0.39
UBA3-202ENST00000361055 DPYSQ14117 519 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 GRM2Q14416 872 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 ANKRD20A4Q4UJ75 823 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 LIN52Q52LA3 116 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 SFT2D3Q587I9 215 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 CES3Q6UWW8 571 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 STRA8Q7Z7C7 330 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 SDCCAG8Q86SQ7 713 aaPredicted RBP12.61□□□□□ -0.39
UBA3-202ENST00000361055 ST13P4Q8IZP2 240 aaPredicted RBP12.61□□□□□ -0.39
UBA3-202ENST00000361055 PLD6Q8N2A8 252 aaKnown RBP12.61□□□□□ -0.39
UBA3-202ENST00000361055 SLC7A14Q8TBB6 771 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 SLC2A14Q8TDB8 520 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 STON2Q8WXE9 905 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 NCSTNQ92542 709 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 CASD1Q96PB1 797 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 BTBD9Q96Q07 612 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 SLC9A7Q96T83 725 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 CENPKQ9BS16 269 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 TRIM4Q9C037 500 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 BRD8Q9H0E9 1235 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 CASS4Q9NQ75 786 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 ZNF358Q9NW07 568 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 SEPT10Q9P0V9 454 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 MID2Q9UJV3 735 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 SLC4A7Q9Y6M7 1214 aa12.61□□□□□ -0.39
UBA3-202ENST00000361055 A0A096LPK6 155 aa12.6□□□□□ -0.39
UBA3-202ENST00000361055 ZCWPW2A0A1B0GU75 182 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms