RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TTC16Q8NEE8 873 aa14.12□□□□□ -0.15
PDLIM5-203ENST00000359265 SH3RF2Q8TEC5 729 aa14.12□□□□□ -0.15
PDLIM5-203ENST00000359265 USP33Q8TEY7 942 aa14.12□□□□□ -0.15
PDLIM5-203ENST00000359265 MAML1Q92585 1016 aa14.12□□□□□ -0.15
PDLIM5-203ENST00000359265 PABPC5Q96DU9 382 aaKnown RBP14.12□□□□□ -0.15
PDLIM5-203ENST00000359265 PWWP2AQ96N64 755 aa14.12□□□□□ -0.15
PDLIM5-203ENST00000359265 AGAP3Q96P47 875 aa14.12□□□□□ -0.15
PDLIM5-203ENST00000359265 SEMA4AQ9H3S1 761 aa14.12□□□□□ -0.15
PDLIM5-203ENST00000359265 XAB2Q9HCS7 855 aaKnown RBP14.12□□□□□ -0.15
PDLIM5-203ENST00000359265 NINJ2Q9NZG7 142 aa14.12□□□□□ -0.15
PDLIM5-203ENST00000359265 KIF26AQ9ULI4 1882 aaPredicted RBP14.12□□□□□ -0.15
PDLIM5-203ENST00000359265 EPG5Q9HCE0 2579 aa14.12□□□□□ -0.15
PDLIM5-203ENST00000359265 BAHCC1Q9P281 2608 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 ILVBLA1L0T0 632 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 ERI2A8K979 691 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 GFRA2O00451 464 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 SCAMP3O14828 347 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 TTC4O95801 387 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 CEBPBP17676 345 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 NFKB1P19838 968 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 FSHRP23945 695 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 RENBPP51606 427 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 SGSHP51688 502 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 GAD2Q05329 585 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 DLX2Q07687 328 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 IFFO1Q0D2I5 559 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 USP4Q13107 963 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 SERINC3Q13530 473 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 HNRNPDQ14103 355 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 SMAD2Q15796 467 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 CTC1Q2NKJ3 1217 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 DNAJC21Q5F1R6 531 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 ATAT1Q5SQI0 421 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 SYCE2Q6PIF2 218 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 ZNF783Q6ZMS7 281 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 CCDC117Q8IWD4 279 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 BBS7Q8IWZ6 715 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 GOLGA6L1Q8N7Z2 621 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 ARHGEF2Q92974 986 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 TMA16Q96EY4 203 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 PKNOX2Q96KN3 472 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 RIPOR3Q96MK2 946 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 SERPINB12Q96P63 405 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 EPB41L4BQ9H329 900 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 KIF9Q9HAQ2 790 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 MED4Q9NPJ6 270 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 TDP1Q9NUW8 608 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 HAUS2Q9NVX0 235 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 CLDND1Q9NY35 253 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 TBC1D30Q9Y2I9 924 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 ANKRD36A6QL64 1941 aa14.11□□□□□ -0.15
PDLIM5-203ENST00000359265 DENND4AQ7Z401 1863 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 MYOFQ9NZM1 2061 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 MYLKQ15746 1914 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 F5H423 210 aaPredicted RBP14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 H0Y626 953 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 ALOX15BO15296 676 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 PRAMEF11O60813 436 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 LUC7L3O95232 432 aaKnown RBP14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 CYBBP04839 570 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 HLA-DQB2P05538 268 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 ABHD2P08910 425 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 MLNP12872 115 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 TCF3P15923 654 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 WEE1P30291 646 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 CD68P34810 354 aaPredicted RBP14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 ACVRL1P37023 503 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 IFNAR2P48551 515 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 OXCT1P55809 520 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 ZXDAP98168 799 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 CBLBQ13191 982 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 BBS9Q3SYG4 887 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 CCDC38Q502W7 563 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 MPPE1Q53F39 396 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 FNBP1LQ5T0N5 605 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 FAM182AQ5T1J6 154 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 SYCP2LQ5T4T6 812 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 TMCO4Q5TGY1 634 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 IL31Q6EBC2 164 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 CROCCP2Q86T23 111 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 ZBED8Q8IZ13 594 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 KRT222Q8N1A0 295 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 BBS5Q8N3I7 341 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 CARNMT1Q8N4J0 409 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 PDCD7Q8N8D1 485 aaKnown RBP14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 ZSCAN18Q8TBC5 510 aaPredicted RBP14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 ING5Q8WYH8 240 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 USP13Q92995 863 aaPredicted RBP14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 C9orf72Q96LT7 481 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 ZNF599Q96NL3 588 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 FCRL5Q96RD9 977 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 SMG9Q9H0W8 520 aaKnown RBP14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 GLOD4Q9HC38 313 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 RBM22Q9NW64 420 aaKnown RBP eCLIP14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 FAM53CQ9NYF3 392 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 FAM50BQ9Y247 325 aa14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 AAR2Q9Y312 384 aaKnown RBP14.1□□□□□ -0.15
PDLIM5-203ENST00000359265 VPS13AQ96RL7 3174 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 GOLGA6L10A6NI86 522 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 J3KR12 359 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms