RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ACMSDQ8TDX5 336 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 KAT8Q9H7Z6 458 aaKnown RBP6.15□□□□□ -1.42
VPS13B-203ENST00000358544 BLOC1S4Q9NUP1 217 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 TMEM9Q9P0T7 183 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 STARP49675 285 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 HNRNPFP52597 415 aaKnown RBP6.15□□□□□ -1.42
VPS13B-203ENST00000358544 MERTKQ12866 999 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF829Q3KNS6 432 aaPredicted RBP6.15□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF568Q3ZCX4 644 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 AP3S1Q92572 193 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 DIRAS2Q96HU8 199 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 GABBR1Q9UBS5 961 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 A0A1W2PPM1 405 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 POLRMTO00411 1230 aaKnown RBP6.15□□□□□ -1.42
VPS13B-203ENST00000358544 SLC22A1O15245 554 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 PIAS1O75925 651 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 ZSCAN5DPP0CG00 497 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 SYNE4Q8N205 404 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 NPY2RP49146 381 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 PACRGLQ8N7B6 248 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 SLC44A1Q8WWI5 657 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 SHROOM3Q8TF72 1996 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF197O14709 1029 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 IL18RAPO95256 599 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 OXSR1O95747 527 aaPredicted RBP6.15□□□□□ -1.42
VPS13B-203ENST00000358544 GNA12Q03113 381 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 USP43Q70EL4 1123 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 PHC2Q8IXK0 858 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 FAM126BQ8IXS8 530 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 LEMD2Q8NC56 503 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 SPATA20Q8TB22 786 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 MED15Q96RN5 788 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 REEP1Q9H902 201 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 PFDN2Q9UHV9 154 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 VPS51Q9UID3 782 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 CHD2O14647 1828 aaKnown RBP6.15□□□□□ -1.42
VPS13B-203ENST00000358544 CAMSAP1Q5T5Y3 1602 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 H0YGN5 161 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 CDH15P55291 814 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 TGFBIQ15582 683 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 KCTD19Q17RG1 926 aaPredicted RBP6.15□□□□□ -1.43
VPS13B-203ENST00000358544 CYP4Z1Q86W10 505 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 DPP10Q8N608 796 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 IGSF9Q9P2J2 1179 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 NFS1Q9Y697 457 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 TCP10L2B9ZVM9 353 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 KLHL18O94889 574 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 PCNAP12004 261 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 ERICH5Q6P6B1 374 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 C12orf43Q96C57 262 aaKnown RBP6.15□□□□□ -1.43
VPS13B-203ENST00000358544 HGH1Q9BTY7 390 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 MND1Q9BWT6 205 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 UBE2QL1A1L167 161 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 MSH4O15457 936 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 SLC2A4P14672 509 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 RPS9P46781 194 aaKnown RBP6.15□□□□□ -1.43
VPS13B-203ENST00000358544 INO80DQ53TQ3 878 aaPredicted RBP6.15□□□□□ -1.43
VPS13B-203ENST00000358544 TNFAIP8L3Q5GJ75 292 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 CNTD1Q8N815 330 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 TRIM54Q9BYV2 358 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 C12orf65Q9H3J6 166 aaKnown RBP6.15□□□□□ -1.43
VPS13B-203ENST00000358544 CNOT6Q9ULM6 557 aaKnown RBP6.15□□□□□ -1.43
VPS13B-203ENST00000358544 ATG2BQ96BY7 2078 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 CYP2F1P24903 491 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 CRABP2P29373 138 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 BTBD16Q32M84 506 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 COLEC12Q5KU26 742 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 MOXD1Q6UVY6 613 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 ARMC8Q8IUR7 673 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 OFCC1Q8IZS5 231 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 SLC4A9Q96Q91 983 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 AASDHPPTQ9NRN7 309 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 ANKRD63C9JTQ0 380 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 MAFGO15525 162 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 METTL21CQ5VZV1 264 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 ZCCHC8Q6NZY4 707 aaKnown RBP6.15□□□□□ -1.43
VPS13B-203ENST00000358544 FAM131AQ6UXB0 335 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 EPS8L1Q8TE68 723 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 POMPQ9Y244 141 aa6.15□□□□□ -1.43
VPS13B-203ENST00000358544 TOR1BO14657 336 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 ANXA9O76027 345 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 CRHR1P34998 444 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 PPIL2Q13356 520 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 DNASE1L3Q13609 305 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 SFT2D3Q587I9 215 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 KCNMB4Q86W47 210 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 IQCF2Q8IXL9 164 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 CYP4Z2PQ8N1L4 340 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 VPS37AQ8NEZ2 397 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 LRTOMTQ8WZ04 291 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 VCPIP1Q96JH7 1222 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 MRPL57Q9BQC6 102 aaKnown RBP6.14□□□□□ -1.43
VPS13B-203ENST00000358544 RGS10O43665 173 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 TIGD2Q4W5G0 525 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 WDR45BQ5MNZ6 344 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 ANGEL2Q5VTE6 544 aaKnown RBP6.14□□□□□ -1.43
VPS13B-203ENST00000358544 SLITRK4Q8IW52 837 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 CDYL2Q8N8U2 506 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 FBXO30Q8TB52 745 aa6.14□□□□□ -1.43
VPS13B-203ENST00000358544 SLC47A1Q96FL8 570 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms