RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 CPNE6O95741 557 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 RPA1P27694 616 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 TBX4P57082 545 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 TAS2R41P59536 307 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 BNIP1Q12981 228 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 THOC7Q6I9Y2 204 aaKnown RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 TMEM132CQ8N3T6 1108 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 ILKAPQ9H0C8 392 aaPredicted RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 LMAN2LQ9H0V9 348 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 BRF2Q9HAW0 419 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 EPB41L4AQ9HCS5 686 aaPredicted RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 HMX1Q9NP08 348 aaPredicted RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 POLR1AO95602 1720 aaPredicted RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 C1orf232A0A0U1RR37 186 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 CPED1A4D0V7 1026 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 QSOX1O00391 747 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 CCL16O15467 120 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 PLIN3O60664 434 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 PRH1P02810 166 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 S100A6P06703 90 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 FGFR3P22607 806 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 PSMD8P48556 350 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 MYBPC3Q14896 1274 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 USP45Q70EL2 814 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 VASH1Q7L8A9 365 aaPredicted RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 CRISPLD1Q9H336 500 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 SNTG2Q9NY99 539 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 RGS17Q9UGC6 210 aaPredicted RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 CIDEBQ9UHD4 219 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 FAM227AF5H4B4 570 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 HBP1O60381 514 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 RPL21P46778 160 aaKnown RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 CHN2P52757 468 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 MZT2AQ6P582 158 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 MAGEC3Q8TD91 643 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 SAT2Q96F10 170 aaPredicted RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 AP1S3Q96PC3 154 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 ENY2Q9NPA8 101 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 SPATA31A1Q5TZJ5 1347 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 LRRC7Q96NW7 1537 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 APOC1P02654 83 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 SERPINB8P50452 374 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 ZNF543Q08ER8 600 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 RBM39Q14498 530 aaKnown RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 MSL3Q8N5Y2 521 aaKnown RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 TRMT10AQ8TBZ6 339 aaKnown RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 ACER1Q8TDN7 264 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 HEPHQ9BQS7 1158 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 COPS4Q9BT78 406 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 CST11Q9H112 138 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 NECTIN3Q9NQS3 549 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 AGPAT5Q9NUQ2 364 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 ARL15Q9NXU5 204 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 CDHR2Q9BYE9 1310 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 IGF2BP3O00425 579 aaKnown RBP eCLIP9.88□□□□□ -0.83
CHD3-202ENST00000358181 XKRYO14609 159 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 TSPAN4O14817 238 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 ZNF189O75820 626 aaPredicted RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 SNRPAP09012 282 aaKnown RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 IL12BP29460 328 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 PNPLA4P41247 253 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 SLC1A1P43005 524 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 MAN2A2P49641 1150 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 MLLT1Q03111 559 aaPredicted RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 ZNF155Q12901 538 aaPredicted RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 TEAD4Q15561 434 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.88□□□□□ -0.83
CHD3-202ENST00000358181 ARMC10Q8N2F6 343 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 FAM111AQ96PZ2 611 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 SETD4Q9NVD3 440 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 USP20Q9Y2K6 914 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 PCDHB5Q9Y5E4 795 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 MYPNQ86TC9 1320 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 IGSF9BQ9UPX0 1349 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 CDC42BPBQ9Y5S2 1711 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 MDFIC2A0A1B0GVS7 189 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 BTN3A1O00481 513 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 PDHBP11177 359 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 UGT1A5P35504 534 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 EIF2B2P49770 351 aaKnown RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 PCDH1Q08174 1060 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 ACAP1Q15027 740 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 CRY1Q16526 586 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 AGKQ53H12 422 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 TBCELQ5QJ74 424 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 SLC30A6Q6NXT4 461 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 C11orf65Q8NCR3 313 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 ACE2Q9BYF1 805 aaPredicted RBP9.88□□□□□ -0.83
CHD3-202ENST00000358181 MTMR12Q9C0I1 747 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 C12orf4Q9NQ89 552 aa9.88□□□□□ -0.83
CHD3-202ENST00000358181 TBL1XO60907 577 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 ZCCHC18P0CG32 403 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 TGFBR2P37173 567 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 TRAF3Q13114 568 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 TUBB3Q13509 450 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 IL27RAQ6UWB1 636 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 EIF3MQ7L2H7 374 aaKnown RBP9.87□□□□□ -0.83
CHD3-202ENST00000358181 FBXO33Q7Z6M2 555 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 ANKRD13AQ8IZ07 590 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 OR10Q1Q8NGQ4 319 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms