RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 FEM1AQ9BSK4 669 aa17.36■□□□□ 0.37
TPM1-205ENST00000357980 SPON2Q9BUD6 331 aa17.36■□□□□ 0.37
TPM1-205ENST00000357980 MUC3BQ9H195 1237 aa17.36■□□□□ 0.37
TPM1-205ENST00000357980 SLC25A51Q9H1U9 297 aa17.36■□□□□ 0.37
TPM1-205ENST00000357980 ZNF576Q9H609 170 aa17.36■□□□□ 0.37
TPM1-205ENST00000357980 LRRC40Q9H9A6 602 aa17.36■□□□□ 0.37
TPM1-205ENST00000357980 UBP1Q9NZI7 540 aa17.36■□□□□ 0.37
TPM1-205ENST00000357980 AAR2Q9Y312 384 aaKnown RBP17.36■□□□□ 0.37
TPM1-205ENST00000357980 ANXA9O76027 345 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 NEBLO76041 1014 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 MT-CYBP00156 380 aaPredicted RBP17.35■□□□□ 0.37
TPM1-205ENST00000357980 TSHRP16473 764 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 MZF1P28698 734 aaPredicted RBP17.35■□□□□ 0.37
TPM1-205ENST00000357980 MFN1Q8IWA4 741 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 IMP4Q96G21 291 aaKnown RBP17.35■□□□□ 0.37
TPM1-205ENST00000357980 CASS4Q9NQ75 786 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 PLK2Q9NYY3 685 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 CDH22Q9UJ99 828 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 PRRC2BQ5JSZ5 2229 aaKnown RBP17.35■□□□□ 0.37
TPM1-205ENST00000357980 GOLGA6CA6NDK9 693 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 PSMD3O43242 534 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 USP12O75317 370 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 ZMPSTE24O75844 475 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 GOLGA6DP0CG33 693 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 FSHRP23945 695 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 OAS2P29728 719 aaKnown RBP17.35■□□□□ 0.37
TPM1-205ENST00000357980 SSTR1P30872 391 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 ALG1LQ6GMV1 187 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 ANKRD54Q6NXT1 300 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 PRPF39Q86UA1 669 aaKnown RBP17.35■□□□□ 0.37
TPM1-205ENST00000357980 MPP5Q8N3R9 675 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.35■□□□□ 0.37
TPM1-205ENST00000357980 ARL8AQ96BM9 186 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 TADA1Q96BN2 335 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 LRRC3BQ96PB8 259 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 KIF9Q9HAQ2 790 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 PLAC1Q9HBJ0 212 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 TMBIM4Q9HC24 238 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 GOLGA6AQ9NYA3 693 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 TBC1D14Q9P2M4 693 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 UBA2Q9UBT2 640 aaPredicted RBP17.35■□□□□ 0.37
TPM1-205ENST00000357980 CLEC4EQ9ULY5 219 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 ACTL7AQ9Y615 435 aa17.35■□□□□ 0.37
TPM1-205ENST00000357980 KIF26AQ9ULI4 1882 aaPredicted RBP17.34■□□□□ 0.37
TPM1-205ENST00000357980 DOCK8Q8NF50 2099 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 A0A087WUV0 522 aaPredicted RBP17.34■□□□□ 0.37
TPM1-205ENST00000357980 CBX4O00257 560 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 MUSKO15146 869 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 TCEA3O75764 348 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 PENKP01210 267 aaPredicted RBP17.34■□□□□ 0.37
TPM1-205ENST00000357980 MMP2P08253 660 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 MYZAPP0CAP1 466 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 CSKP41240 450 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 GEMP55040 296 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 MAXP61244 160 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 ARF5P84085 180 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 NIPAL4Q0D2K0 466 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 RFTN1Q14699 578 aaPredicted RBP17.34■□□□□ 0.37
TPM1-205ENST00000357980 TTMPQ5BVD1 217 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 TMEM25Q86YD3 366 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 CELF5Q8N6W0 485 aaKnown RBP17.34■□□□□ 0.37
TPM1-205ENST00000357980 KIAA1958Q8N8K9 716 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 OR52K1Q8NGK4 314 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 FIBINQ8TAL6 211 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 ARRDC2Q8TBH0 407 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 OTUB2Q96DC9 234 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 RSPRY1Q96DX4 576 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 APOL5Q9BWW9 433 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 VPS37BQ9H9H4 285 aa17.34■□□□□ 0.37
TPM1-205ENST00000357980 PIH1D1Q9NWS0 290 aaKnown RBP17.34■□□□□ 0.37
TPM1-205ENST00000357980 RNF40O75150 1001 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 CD160O95971 181 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 CYBBP04839 570 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 ADRA1AP35348 466 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 IHHQ14623 411 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 KRT71Q3SY84 523 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 NAPEPLDQ6IQ20 393 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 KDELC1Q6UW63 502 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 CAPN12Q6ZSI9 719 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 C3orf62Q6ZUJ4 267 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 PALM2Q8IXS6 379 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 GOLGA6L1Q8N7Z2 621 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 DCAF4L2Q8NA75 395 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 EPS8L3Q8TE67 593 aaKnown RBP17.33■□□□□ 0.37
TPM1-205ENST00000357980 FGF13Q92913 245 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 LMLNQ96KR4 655 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 ASB16Q96NS5 453 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 PSKH2Q96QS6 385 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 EBNA1BP2Q99848 306 aaKnown RBP17.33■□□□□ 0.37
TPM1-205ENST00000357980 MGME1Q9BQP7 344 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 ROPN1BQ9BZX4 212 aaPredicted RBP17.33■□□□□ 0.37
TPM1-205ENST00000357980 LINC00597Q9H2U6 94 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 ROPN1Q9HAT0 212 aaPredicted RBP17.33■□□□□ 0.37
TPM1-205ENST00000357980 ZC3H7BQ9UGR2 993 aaKnown RBP17.33■□□□□ 0.37
TPM1-205ENST00000357980 VPS28Q9UK41 221 aa17.33■□□□□ 0.37
TPM1-205ENST00000357980 MYLKQ15746 1914 aa17.33■□□□□ 0.36
TPM1-205ENST00000357980 SDR42E2A6NKP2 422 aa17.33■□□□□ 0.36
TPM1-205ENST00000357980 GOLGA8KD6RF30 607 aa17.33■□□□□ 0.36
TPM1-205ENST00000357980 SNAP91O60641 907 aa17.33■□□□□ 0.36
TPM1-205ENST00000357980 CPP00450 1065 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms