RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 EIF3HO15372 352 aaKnown RBP eCLIP18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 RIPK2O43353 540 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 SNAP91O60641 907 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 TTC4O95801 387 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 CD70P32970 193 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 ETFBP38117 255 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 EIF3BP55884 814 aaKnown RBP18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 ARF5P84085 180 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 LBRQ14739 615 aaKnown RBP18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 EML3Q32P44 896 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 TMCO4Q5TGY1 634 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 DENND2CQ68D51 928 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 TRIM68Q6AZZ1 485 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 ASTLQ6HA08 431 aaPredicted RBP18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 PPP1R21Q6ZMI0 780 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 CENPUQ71F23 418 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 ZNF534Q76KX8 674 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 KLHDC8BQ8IXV7 354 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 APCDD1Q8J025 514 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 MCUQ8NE86 351 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 OSCP1Q8WVF1 389 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 OXNAD1Q96HP4 312 aaPredicted RBP18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 PKNOX2Q96KN3 472 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 RIPOR3Q96MK2 946 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 ZNF599Q96NL3 588 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 NT5MQ9NPB1 228 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 EIF2B3Q9NR50 452 aaKnown RBP18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 OBP2AQ9NY56 170 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 MARK1Q9P0L2 795 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 E7ESA3 106 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 E7EVH7 732 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 CBX4O00257 560 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 ALOX15BO15296 676 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 BANF1O75531 89 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 SYF2O95926 243 aaKnown RBP18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 CD160O95971 181 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 TYRP14679 529 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 GRIA1P42261 906 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 MMP13P45452 471 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 IFNAR2P48551 515 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 ARL4CP56559 192 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 MTM1Q13496 603 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 HSP90B2PQ58FF3 399 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 KCTD11Q693B1 232 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 CAND1Q86VP6 1230 aaKnown RBP18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 SMRP1Q8NCR6 262 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 SPATA22Q8NHS9 363 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 ZFYVE19Q96K21 471 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 SERPINB12Q96P63 405 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 FCRL5Q96RD9 977 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 VPS28Q9UK41 221 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 INTS6Q9UL03 887 aaKnown RBP18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 TTLL3Q9Y4R7 772 aa18.47■□□□□ 0.55
SMARCD3-202ENST00000356800 MUSKO15146 869 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 OPA1O60313 960 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 AVILO75366 819 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 CYP17A1P05093 508 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 HLA-FP30511 346 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 MTHFRP42898 656 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 MAGEA4P43358 317 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 FAM193AP78312 1265 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 CDK16Q00536 496 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 OLIG2Q13516 323 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 SLC29A2Q14542 456 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 FASTKD3Q14CZ7 662 aaKnown RBP18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 DHCR24Q15392 516 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 VITQ6UXI7 678 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 PDIK1LQ8N165 341 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 AGGF1Q8N302 714 aaeCLIP18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 NSMCE1Q8WV22 266 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 WDR83Q9BRX9 315 aaKnown RBP18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 SAYSD1Q9NPB0 183 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 UBP1Q9NZI7 540 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 KIAA1522Q9P206 1035 aaPredicted RBP18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 UBA2Q9UBT2 640 aaPredicted RBP18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 VPS51Q9UID3 782 aa18.46■□□□□ 0.55
SMARCD3-202ENST00000356800 MIA3Q5JRA6 1907 aa18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 SPTBN5Q9NRC6 3674 aaKnown RBP18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 H3BQF6 201 aa18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 AP2A1O95782 977 aa18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 ARSAP15289 507 aa18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 MAXP61244 160 aa18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 NIPAL4Q0D2K0 466 aa18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 SPARCL1Q14515 664 aa18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 IHHQ14623 411 aa18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 HP1BP3Q5SSJ5 553 aaPredicted RBP18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 LINGO4Q6UY18 593 aa18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 DCAF4L2Q8NA75 395 aa18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 TTC25Q96NG3 672 aa18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 PLA2G2FQ9BZM2 168 aa18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 ZFP14Q9HCL3 533 aa18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 ABCB8Q9NUT2 735 aa18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 NINJ2Q9NZG7 142 aa18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 COL4A3Q01955 1670 aa18.45■□□□□ 0.54
SMARCD3-202ENST00000356800 NEBLO76041 1014 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 SUN1O94901 812 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 MT-CYBP00156 380 aaPredicted RBP18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 LAMP2P13473 410 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 GBP2P32456 591 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms