RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 PHTF1Q9UMS5 762 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 REXO2Q9Y3B8 237 aaKnown RBP5.61□□□□□ -1.51
PTPRD-202ENST00000356435 PCDHGB3Q9Y5G1 929 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 C15orf38-AP3S2A0A0A6YYH1 394 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 ADM5C9JUS6 153 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 GTPBP1O00178 669 aaKnown RBP5.61□□□□□ -1.51
PTPRD-202ENST00000356435 GLUD1P00367 558 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 LTFP02788 710 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 PSMD4P55036 377 aaKnown RBP5.61□□□□□ -1.51
PTPRD-202ENST00000356435 SLC6A3Q01959 620 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 ROR2Q01974 943 aaKnown RBP5.61□□□□□ -1.51
PTPRD-202ENST00000356435 RHAGQ02094 409 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 GRB10Q13322 594 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 XKR4Q5GH76 650 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 ARMC3Q5W041 872 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF57Q68EA5 555 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-202ENST00000356435 GALNT18Q6P9A2 607 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 ARPINQ7Z6K5 226 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 REM2Q8IYK8 340 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-202ENST00000356435 ZMYM5Q9UJ78 669 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 ENO4A6NNW6 628 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 USP17L7P0C7H9 530 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 ARP10275 920 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 CLUP10909 449 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 CALB2P22676 271 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 PFKPQ01813 784 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 SRSF11Q05519 484 aaKnown RBP5.61□□□□□ -1.51
PTPRD-202ENST00000356435 MSLNQ13421 630 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-202ENST00000356435 MYBPC2Q14324 1141 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 FAM187BQ17R55 369 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 INAVAQ3KP66 663 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 TBCELQ5QJ74 424 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 IL27RAQ6UWB1 636 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 NIPA1Q7RTP0 329 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 KYQ8NBH2 561 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 NEK7Q8TDX7 302 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 RIT1Q92963 219 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 CRELD1Q96HD1 420 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 PRMT6Q96LA8 375 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF354BQ96LW1 612 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 SLC9A7Q96T83 725 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 CELF4Q9BZC1 486 aaKnown RBP5.61□□□□□ -1.51
PTPRD-202ENST00000356435 GLIS2Q9BZE0 524 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-202ENST00000356435 KLHL4Q9C0H6 718 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.61□□□□□ -1.51
PTPRD-202ENST00000356435 AGPAT5Q9NUQ2 364 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 FBXO28Q9NVF7 368 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 UBP1Q9NZI7 540 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 POLLQ9UGP5 575 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 SLC24A2Q9UI40 661 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 PAIP2BQ9ULR5 123 aaKnown RBP5.61□□□□□ -1.51
PTPRD-202ENST00000356435 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-202ENST00000356435 KCNH1O95259 989 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 S100A3P33764 101 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 SULT2A1Q06520 285 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 PDZK1Q5T2W1 519 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 SMIM5Q71RC9 77 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 DHFR2Q86XF0 187 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 SCUBE1Q8IWY4 988 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 GPR135Q8IZ08 494 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 NELL1Q92832 810 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 LRRC39Q96DD0 335 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 ADAM2Q99965 735 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 TLR10Q9BXR5 811 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 IDI2Q9BXS1 227 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 MAT2BQ9NZL9 334 aa5.61□□□□□ -1.51
PTPRD-202ENST00000356435 ZMYND8Q9ULU4 1186 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-202ENST00000356435 MOXD2PA6NHM9 499 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 SERPINE1P05121 402 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 SMIM10L2AP0DMW4 78 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 SMIM10L2BP0DMW5 78 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 CES1P23141 567 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 CRATP43155 626 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 NDST1P52848 882 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 SP3Q02447 781 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 MTAPQ13126 283 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 TAB1Q15750 504 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 N4BP2L1Q5TBK1 243 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 ALKBH2Q6NS38 261 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 FAM126BQ8IXS8 530 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 UXS1Q8NBZ7 420 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 POMKQ9H5K3 350 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 C3orf14Q9HBI5 128 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF232Q9UNY5 417 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 SHOC2Q9UQ13 582 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 MRPS17Q9Y2R5 130 aaKnown RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 NDUFAF1Q9Y375 327 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 LYVE1Q9Y5Y7 322 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 DISP2A7MBM2 1401 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 AGRPO00253 132 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 MICAL2O94851 1124 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 IGFALSP35858 605 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 ELF3P78545 371 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 GPSM1Q86YR5 675 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 NKAPQ8N5F7 415 aaKnown RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 OR2W6PQ8NHA6 318 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 ENKURQ8TC29 256 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 ZFAND2BQ8WV99 257 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 ATXN2LQ8WWM7 1075 aaKnown RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 TRIM63Q969Q1 353 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms