RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 VAPBO95292 243 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 CAPN1P07384 714 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 MLLT6P55198 1093 aaPredicted RBP15.97■□□□□ 0.15
RTN3-205ENST00000356000 PRKCEQ02156 737 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 PPP3CAQ08209 521 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 ATP13A4Q4VNC1 1196 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 SLC9B1Q4ZJI4 515 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 WDR78Q5VTH9 848 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 XAF1Q6GPH4 301 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 SLCO6A1Q86UG4 719 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 SCML4Q8N228 414 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 SEPT8Q92599 483 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 DEPDC7Q96QD5 511 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 C20orf96Q9NUD7 363 aaPredicted RBP15.97■□□□□ 0.15
RTN3-205ENST00000356000 KLHL11Q9NVR0 708 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 RAB20Q9NX57 234 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 IFT80Q9P2H3 777 aaPredicted RBP15.97■□□□□ 0.15
RTN3-205ENST00000356000 ZNRF3Q9ULT6 936 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 POLHQ9Y253 713 aa15.97■□□□□ 0.15
RTN3-205ENST00000356000 CAB39Q9Y376 341 aaPredicted RBP15.97■□□□□ 0.15
RTN3-205ENST00000356000 MEIS1O00470 390 aa15.96■□□□□ 0.15
RTN3-205ENST00000356000 PAPSS1O43252 624 aaPredicted RBP15.96■□□□□ 0.15
RTN3-205ENST00000356000 AVILO75366 819 aa15.96■□□□□ 0.15
RTN3-205ENST00000356000 TOP3BO95985 862 aaKnown RBP15.96■□□□□ 0.15
RTN3-205ENST00000356000 KCNA4P22459 653 aa15.96■□□□□ 0.15
RTN3-205ENST00000356000 CD40LGP29965 261 aa15.96■□□□□ 0.15
RTN3-205ENST00000356000 AP2S1P53680 142 aaPredicted RBP15.96■□□□□ 0.15
RTN3-205ENST00000356000 GDF10P55107 478 aa15.96■□□□□ 0.15
RTN3-205ENST00000356000 MRPS15P82914 257 aaKnown RBP15.96■□□□□ 0.15
RTN3-205ENST00000356000 NAB1Q13506 487 aa15.96■□□□□ 0.15
RTN3-205ENST00000356000 SLC12A1Q13621 1099 aa15.96■□□□□ 0.15
RTN3-205ENST00000356000 KCTD20Q7Z5Y7 419 aa15.96■□□□□ 0.15
RTN3-205ENST00000356000 ANKRD13AQ8IZ07 590 aa15.96■□□□□ 0.15
RTN3-205ENST00000356000 CBR4Q8N4T8 237 aa15.96■□□□□ 0.15
RTN3-205ENST00000356000 OR6F1Q8NGZ6 308 aa15.96■□□□□ 0.15
RTN3-205ENST00000356000 MASTLQ96GX5 879 aa15.96■□□□□ 0.15
RTN3-205ENST00000356000 NDFIP2Q9NV92 336 aa15.96■□□□□ 0.15
RTN3-205ENST00000356000 PTPRFP10586 1907 aa15.96■□□□□ 0.15
RTN3-205ENST00000356000 OR5K3A6NET4 321 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 SLC22A2O15244 555 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 TMEM191BP0C7N4 346 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 CHRNA5P30532 468 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 PSMD8P48556 350 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 PLA2G16P53816 162 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 CACNB3P54284 484 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 ABCE1P61221 599 aaKnown RBP15.96■□□□□ 0.14
RTN3-205ENST00000356000 PPIL2Q13356 520 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 ART3Q13508 389 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 TAF5Q15542 800 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 STK11Q15831 433 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 LLGL2Q6P1M3 1020 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 CRTC3Q6UUV7 619 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 SLC16A12Q6ZSM3 486 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.96■□□□□ 0.14
RTN3-205ENST00000356000 DTX3Q8N9I9 347 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 SLC39A13Q96H72 371 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 FBXL20Q96IG2 436 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 MAGED4Q96JG8 741 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 TRIM39Q9HCM9 518 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 EMCNQ9ULC0 261 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 PCDHB4Q9Y5E5 795 aa15.96■□□□□ 0.14
RTN3-205ENST00000356000 COL11A2P13942 1736 aaPredicted RBP15.95■□□□□ 0.14
RTN3-205ENST00000356000 KLRG2A4D1S0 409 aaPredicted RBP15.95■□□□□ 0.14
RTN3-205ENST00000356000 CFL1P23528 166 aaKnown RBP15.95■□□□□ 0.14
RTN3-205ENST00000356000 ECE1P42892 770 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 MFAP3P55082 362 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 DSTNP60981 165 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 PCLAFQ15004 111 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 ATAD3CQ5T2N8 411 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 CCNYL2Q5T2Q4 361 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 AGAP9Q5VTM2 703 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 CYP20A1Q6UW02 462 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 SLC9A9Q8IVB4 645 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 FBXL6Q8N531 539 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 LINC00469Q8N7U9 141 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 OR6Q1Q8NGQ2 317 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 COA7Q96BR5 231 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 UQCC2Q9BRT2 126 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 MTMR12Q9C0I1 747 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 NARFLQ9H6Q4 476 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 EFCAB1Q9HAE3 211 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 RRAGCQ9HB90 399 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 TBC1D22BQ9NU19 505 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 ADPRHL2Q9NX46 363 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 ATPIF1Q9UII2 106 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 USTQ9Y2C2 406 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 RAD54BQ9Y620 910 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 CNTNAP2Q9UHC6 1331 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 HMX2A2RU54 273 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 TOR1BO14657 336 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 RAD51BO15315 384 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 CLIC3O95833 236 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 SPATA31C1P0DKV0 1188 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 TBXAS1P24557 533 aaPredicted RBP15.95■□□□□ 0.14
RTN3-205ENST00000356000 PRKCHP24723 683 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 RBL1P28749 1068 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 PTPN7P35236 360 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 YAP1P46937 504 aaKnown RBP15.95■□□□□ 0.14
RTN3-205ENST00000356000 GPLD1P80108 840 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 PAGE2BQ5JRK9 111 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms