RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 A6NNZ2 444 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 H0YHG0 523 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 MUSKO15146 869 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 SUV39H1O43463 412 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 PPP6R2O75170 966 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 PCDH8O95206 1070 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 LTFP02788 710 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 SETSIPP0DME0 302 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 HNRNPA2B1P22626 353 aaKnown RBP11.49□□□□□ -0.57
RTN3-204ENST00000354497 NR2F2P24468 414 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 CORO7P57737 925 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 SARNPP82979 210 aaKnown RBP11.49□□□□□ -0.57
RTN3-204ENST00000354497 TLE1Q04724 770 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 SRSF6Q13247 344 aaKnown RBP11.49□□□□□ -0.57
RTN3-204ENST00000354497 NR0B2Q15466 257 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 KRT39Q6A163 491 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 GCNT7Q6ZNI0 430 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 Q6ZSR6 202 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 Q6ZVU0 165 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 C10orf67Q8IYJ2 551 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 SLC22A18ASQ8N1D0 253 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 ZNF548Q8NEK5 533 aaPredicted RBP11.49□□□□□ -0.57
RTN3-204ENST00000354497 GPT2Q8TD30 523 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 LMX1AQ8TE12 382 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 KCTD13Q8WZ19 329 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 RNF34Q969K3 372 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 AZIN2Q96A70 460 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 GRAMD1AQ96CP6 724 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 SGF29Q96ES7 293 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 SERPINB11Q96P15 392 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 MIS12Q9H081 205 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 EPB41L5Q9HCM4 733 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 DYRK4Q9NR20 520 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 TMEM63CQ9P1W3 806 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 XPO7Q9UIA9 1087 aaKnown RBP11.49□□□□□ -0.57
RTN3-204ENST00000354497 SPTA1P02549 2419 aa11.49□□□□□ -0.57
RTN3-204ENST00000354497 AGRPO00253 132 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 KPNA3O00505 521 aaPredicted RBP11.48□□□□□ -0.57
RTN3-204ENST00000354497 EFSO43281 561 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 KLRC4O43908 158 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 PPFIA2O75334 1257 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 APOEP02649 317 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 AFPP02771 609 aaKnown RBP11.48□□□□□ -0.57
RTN3-204ENST00000354497 GP1BBP13224 206 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 TACR2P21452 398 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 MXI1P50539 228 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 TAS2R38P59533 333 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 SULT2A1Q06520 285 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 UBAP2LQ14157 1087 aaKnown RBP11.48□□□□□ -0.57
RTN3-204ENST00000354497 TGIF1Q15583 401 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 PERM1Q5SV97 790 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 KRBA2Q6ZNG9 492 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 CLEC14AQ86T13 490 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 HORMAD1Q86X24 394 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 FBXL13Q8NEE6 735 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 TPCN2Q8NHX9 752 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 DQX1Q8TE96 717 aaKnown RBP11.48□□□□□ -0.57
RTN3-204ENST00000354497 FRS2Q8WU20 508 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 IRGQQ8WZA9 623 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 FAM131CQ96AQ9 280 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 ZNF396Q96N95 335 aaPredicted RBP11.48□□□□□ -0.57
RTN3-204ENST00000354497 ZSCAN16Q9H4T2 348 aaPredicted RBP11.48□□□□□ -0.57
RTN3-204ENST00000354497 RAB20Q9NX57 234 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 NCKIPSDQ9NZQ3 722 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 SERTAD1Q9UHV2 236 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 PPM1HQ9ULR3 514 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 MTMR6Q9Y217 621 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 TLR6Q9Y2C9 796 aa11.48□□□□□ -0.57
RTN3-204ENST00000354497 PIEZO2Q9H5I5 2752 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 F5H5T6 163 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 CASC3O15234 703 aaKnown RBP11.47□□□□□ -0.57
RTN3-204ENST00000354497 MAPK13O15264 365 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 LZTS3O60299 673 aaPredicted RBP11.47□□□□□ -0.57
RTN3-204ENST00000354497 TCEA3O75764 348 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 ITGA2BP08514 1039 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 TPM1P09493 284 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 VDRP11473 427 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 SFTPCP11686 197 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 ITGB6P18564 788 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 SLC5A2P31639 672 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 PSMC2P35998 433 aaKnown RBP11.47□□□□□ -0.57
RTN3-204ENST00000354497 SPIDRQ14159 915 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 DLG2Q15700 870 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 ZNF284Q2VY69 593 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 FOXD4L6Q3SYB3 417 aaPredicted RBP11.47□□□□□ -0.57
RTN3-204ENST00000354497 PIP5KL1Q5T9C9 394 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 SEL1L3Q68CR1 1132 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 XKR5Q6UX68 686 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 FOXD4L3Q6VB84 417 aaPredicted RBP11.47□□□□□ -0.57
RTN3-204ENST00000354497 C14orf80Q86SX3 495 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 TAC4Q86UU9 113 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 TMEM174Q8WUU8 243 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 GLMNQ92990 594 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 FAM149B1Q96BN6 582 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 IFT43Q96FT9 208 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 EEF2KMTQ96G04 330 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 IL12RB2Q99665 862 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 NAALADL1Q9UQQ1 740 aa11.47□□□□□ -0.57
RTN3-204ENST00000354497 UBR5O95071 2799 aaPredicted RBP11.47□□□□□ -0.57
RTN3-204ENST00000354497 ARID1BQ8NFD5 2236 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms