RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 MLNP12872 115 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 PHKG1Q16816 387 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 AGKQ53H12 422 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 MTSS1LQ765P7 747 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 MILR1Q7Z6M3 343 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 GPSM1Q86YR5 675 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 OR56A4Q8NGH8 313 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 DQX1Q8TE96 717 aaKnown RBP15.1■□□□□ 0.01
COL17A1-201ENST00000353479 KCTD15Q96SI1 283 aaPredicted RBP15.1■□□□□ 0.01
COL17A1-201ENST00000353479 TCF25Q9BQ70 676 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 PARVBQ9HBI1 364 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 TCF7L2Q9NQB0 619 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 KIAA1522Q9P206 1035 aaPredicted RBP15.1■□□□□ 0.01
COL17A1-201ENST00000353479 PAPSS1O43252 624 aaPredicted RBP15.1■□□□□ 0.01
COL17A1-201ENST00000353479 FGF19O95750 216 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 WARSP23381 471 aaKnown RBP15.1■□□□□ 0.01
COL17A1-201ENST00000353479 DGKAP23743 735 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 METTL6Q8TCB7 284 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 ELMO1Q92556 727 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 OXCT2Q9BYC2 517 aaPredicted RBP15.1■□□□□ 0.01
COL17A1-201ENST00000353479 Q9Y3F1 56 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 AVILO75366 819 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 GPR1P46091 355 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 ALDH9A1P49189 494 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 CDK18Q07002 472 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 TGM3Q08188 693 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 RFWD3Q6PCD5 774 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 METTL3Q86U44 580 aaKnown RBP15.1■□□□□ 0.01
COL17A1-201ENST00000353479 VPS50Q96JG6 964 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 TSEN34Q9BSV6 310 aaKnown RBP15.1■□□□□ 0.01
COL17A1-201ENST00000353479 ALG9Q9H6U8 611 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 MIEF1Q9NQG6 463 aa15.1■□□□□ 0.01
COL17A1-201ENST00000353479 C6orf203Q9P0P8 240 aaPredicted RBP15.1■□□□□ 0.01
COL17A1-201ENST00000353479 VGLL3A8MV65 326 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 SHBGP04278 402 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 HOXB8P17481 243 aaPredicted RBP15.09■□□□□ 0.01
COL17A1-201ENST00000353479 ADRA1DP25100 572 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 ECHDC2Q86YB7 292 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 ART4Q93070 314 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 MINDY3Q9H8M7 445 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 PCDHB9Q9Y5E1 797 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 LRCH4O75427 683 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 CLDN11O75508 207 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 PIAS1O75925 651 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 RPN2P04844 631 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 TMEM63BQ5T3F8 832 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 AFTPHQ6ULP2 937 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 NDNQ99608 321 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 LPIN3Q9BQK8 851 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 C11orf49Q9H6J7 331 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 THAP1Q9NVV9 213 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 SYBUQ9NX95 663 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 POLG2Q9UHN1 485 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 ASPAP45381 313 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 IRGQQ8WZA9 623 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 VNN1O95497 513 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 CCL5P13501 91 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 SKIV2L2P42285 1042 aaKnown RBP15.09■□□□□ 0.01
COL17A1-201ENST00000353479 FSTL1Q12841 308 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 SLC26A9Q7LBE3 791 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 FBXO22Q8NEZ5 403 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 SKA1Q96BD8 255 aa15.09■□□□□ 0.01
COL17A1-201ENST00000353479 NR1H4Q96RI1 486 aaPredicted RBP15.09■□□□□ 0.01
COL17A1-201ENST00000353479 FAM126AQ9BYI3 521 aaPredicted RBP15.09■□□□□ 0.01
COL17A1-201ENST00000353479 H3BMM5 538 aa15.08■□□□□ 0.01
COL17A1-201ENST00000353479 SH3BGRLO75368 114 aa15.08■□□□□ 0.01
COL17A1-201ENST00000353479 PBX3P40426 434 aa15.08■□□□□ 0.01
COL17A1-201ENST00000353479 TEX9Q8N6V9 391 aa15.08■□□□□ 0.01
COL17A1-201ENST00000353479 PGM2Q96G03 612 aa15.08■□□□□ 0.01
COL17A1-201ENST00000353479 GNPTGQ9UJJ9 305 aa15.08■□□□□ 0.01
COL17A1-201ENST00000353479 PADI4Q9UM07 663 aa15.08■□□□□ 0.01
COL17A1-201ENST00000353479 E9PAM4 449 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 CTSEP14091 401 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 WNT3AP56704 352 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 PRKCQQ04759 706 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 TIGD5Q53EQ6 642 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 C11orf74Q86VG3 221 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 ZNF614Q8N883 585 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 FNDC5Q8NAU1 212 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 SEZ6LQ9BYH1 1024 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 RAD18Q9NS91 495 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.08■□□□□ 0
COL17A1-201ENST00000353479 TMEM114B3SHH9 223 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 DDX3YO15523 660 aaKnown RBP15.08■□□□□ 0
COL17A1-201ENST00000353479 C1RP00736 705 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 CCDC166P0CW27 439 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 STXBP5Q5T5C0 1151 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 DUPD1Q68J44 220 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 MAGEB10Q96LZ2 347 aaPredicted RBP15.08■□□□□ 0
COL17A1-201ENST00000353479 HGH1Q9BTY7 390 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 BRD9Q9H8M2 597 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 SCHIP1Q9P0W5 487 aaPredicted RBP15.08■□□□□ 0
COL17A1-201ENST00000353479 OPTCQ9UBM4 332 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 TAGLN3Q9UI15 199 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 MFSD11O43934 449 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 TBC1D4O60343 1298 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 NDUFS2O75306 463 aa15.08■□□□□ 0
COL17A1-201ENST00000353479 ZC3H12BQ5HYM0 836 aaKnown RBP15.08■□□□□ 0
COL17A1-201ENST00000353479 BNC2Q6ZN30 1099 aaPredicted RBP15.08■□□□□ 0
COL17A1-201ENST00000353479 PLEKHA8Q96JA3 519 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms