RNA–Protein interactions for RNA: ENST00000353334.10

CD74-202, Transcript of CD74 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD74, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-202ENST00000353334 PAFAH1B1P43034 410 aa13.54□□□□□ -0.24
CD74-202ENST00000353334 PPP3CAQ08209 521 aa13.54□□□□□ -0.24
CD74-202ENST00000353334 ITIH4Q14624 930 aa13.54□□□□□ -0.24
CD74-202ENST00000353334 PPP1R7Q15435 360 aa13.54□□□□□ -0.24
CD74-202ENST00000353334 DCAF12L1Q5VU92 463 aa13.54□□□□□ -0.24
CD74-202ENST00000353334 TPGS1Q6ZTW0 290 aa13.54□□□□□ -0.24
CD74-202ENST00000353334 CACUL1Q86Y37 369 aa13.54□□□□□ -0.24
CD74-202ENST00000353334 NUP93Q8N1F7 819 aa13.54□□□□□ -0.24
CD74-202ENST00000353334 ZNF653Q96CK0 615 aa13.54□□□□□ -0.24
CD74-202ENST00000353334 ANKRD36BP1Q96IX9 119 aa13.54□□□□□ -0.24
CD74-202ENST00000353334 PBKQ96KB5 322 aa13.54□□□□□ -0.24
CD74-202ENST00000353334 KCNK16Q96T55 309 aa13.54□□□□□ -0.24
CD74-202ENST00000353334 CDC6Q99741 560 aa13.54□□□□□ -0.24
CD74-202ENST00000353334 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.54□□□□□ -0.24
CD74-202ENST00000353334 ELOVL4Q9GZR5 314 aa13.54□□□□□ -0.24
CD74-202ENST00000353334 MKRN2Q9H000 416 aaKnown RBP13.54□□□□□ -0.24
CD74-202ENST00000353334 GMIPQ9P107 970 aa13.54□□□□□ -0.24
CD74-202ENST00000353334 USP36Q9P275 1121 aaKnown RBP13.54□□□□□ -0.24
CD74-202ENST00000353334 AJAP1Q9UKB5 411 aaPredicted RBP13.54□□□□□ -0.24
CD74-202ENST00000353334 TFR2Q9UP52 801 aa13.54□□□□□ -0.24
CD74-202ENST00000353334 TMED5Q9Y3A6 229 aa13.54□□□□□ -0.24
CD74-202ENST00000353334 E7EVH7 732 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 ATXN7O15265 892 aaPredicted RBP13.53□□□□□ -0.24
CD74-202ENST00000353334 GREM1O60565 184 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 TNNC2P02585 160 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 TRIM49P0CI25 452 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 TRIM49CP0CI26 452 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 ATP11AP98196 1134 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 CYP24A1Q07973 514 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 TSNAXIP1Q2TAA8 658 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 ACCSLQ4AC99 568 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 HIBCHQ6NVY1 386 aaPredicted RBP13.53□□□□□ -0.24
CD74-202ENST00000353334 DBX2Q6ZNG2 339 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 MREGQ8N565 214 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 LRRC57Q8N9N7 239 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 PDZD8Q8NEN9 1154 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 OR6B3Q8NGW1 331 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 P2RY11Q96G91 374 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 NAF1Q96HR8 494 aaKnown RBP13.53□□□□□ -0.24
CD74-202ENST00000353334 PCDH18Q9HCL0 1135 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 CTTNBP2NLQ9P2B4 639 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 EIF2B4Q9UI10 523 aaKnown RBP13.53□□□□□ -0.24
CD74-202ENST00000353334 G3BP2Q9UN86 482 aaKnown RBP13.53□□□□□ -0.24
CD74-202ENST00000353334 STON1Q9Y6Q2 735 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 KNL1Q8NG31 2342 aa13.53□□□□□ -0.24
CD74-202ENST00000353334 ANKRD62A6NC57 917 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 VDRP11473 427 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 CSNK1EP49674 416 aaKnown RBP13.52□□□□□ -0.25
CD74-202ENST00000353334 TPMTP51580 245 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 AP3M2P53677 418 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 MFAP3P55082 362 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 CLDN6P56747 220 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 GCNT1Q02742 428 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 MPP3Q13368 585 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 BIRC3Q13489 604 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 PSMD6Q15008 389 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 TAF11Q15544 211 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 DHRS13Q6UX07 377 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 LRIG3Q6UXM1 1119 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 CBWD2Q8IUF1 395 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 RHOT2Q8IXI1 618 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 FAM71AQ8IYT1 594 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 PDCD7Q8N8D1 485 aaKnown RBP13.52□□□□□ -0.25
CD74-202ENST00000353334 EIF1ADQ8N9N8 165 aaKnown RBP13.52□□□□□ -0.25
CD74-202ENST00000353334 ZBTB8BQ8NAP8 495 aaPredicted RBP13.52□□□□□ -0.25
CD74-202ENST00000353334 C1orf216Q8TAB5 229 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 RFFLQ8WZ73 363 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 OVCA2Q8WZ82 227 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 SHC3Q92529 594 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 GFM2Q969S9 779 aaKnown RBP13.52□□□□□ -0.25
CD74-202ENST00000353334 ZNF570Q96NI8 536 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 SMC6Q96SB8 1091 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 ARPC5LQ9BPX5 153 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 NACA2Q9H009 215 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 ISCUQ9H1K1 167 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 TMEM98Q9Y2Y6 226 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 PCDHGB2Q9Y5G2 931 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 RAI2Q9Y5P3 530 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 NAV2Q8IVL1 2488 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 PTPRQQ9UMZ3 2332 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 CABIN1Q9Y6J0 2220 aa13.52□□□□□ -0.25
CD74-202ENST00000353334 ZNF233A6NK53 670 aa13.51□□□□□ -0.25
CD74-202ENST00000353334 METTL12A8MUP2 240 aa13.51□□□□□ -0.25
CD74-202ENST00000353334 TK2O00142 265 aa13.51□□□□□ -0.25
CD74-202ENST00000353334 PLK4O00444 970 aa13.51□□□□□ -0.25
CD74-202ENST00000353334 BIRC5O15392 142 aa13.51□□□□□ -0.25
CD74-202ENST00000353334 PALMO75781 387 aa13.51□□□□□ -0.25
CD74-202ENST00000353334 MTA2O94776 668 aa13.51□□□□□ -0.25
CD74-202ENST00000353334 PAEPP09466 180 aa13.51□□□□□ -0.25
CD74-202ENST00000353334 CISD3P0C7P0 127 aa13.51□□□□□ -0.25
CD74-202ENST00000353334 DGKGP49619 791 aa13.51□□□□□ -0.25
CD74-202ENST00000353334 TUBP50607 506 aa13.51□□□□□ -0.25
CD74-202ENST00000353334 SLC5A3P53794 718 aa13.51□□□□□ -0.25
CD74-202ENST00000353334 DLG4P78352 724 aa13.51□□□□□ -0.25
CD74-202ENST00000353334 KLC1Q07866 573 aa13.51□□□□□ -0.25
CD74-202ENST00000353334 SMAD1Q15797 465 aaKnown RBP13.51□□□□□ -0.25
CD74-202ENST00000353334 PPP1R15BQ5SWA1 713 aa13.51□□□□□ -0.25
CD74-202ENST00000353334 SNX30Q5VWJ9 437 aa13.51□□□□□ -0.25
CD74-202ENST00000353334 PPP1R2P3Q6NXS1 205 aa13.51□□□□□ -0.25
CD74-202ENST00000353334 IL27RAQ6UWB1 636 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms