RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 KCNT2Q6UVM3 1135 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 RNF111Q6ZNA4 994 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 ATG14Q6ZNE5 492 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 RAPH1Q70E73 1250 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 FAM72BQ86X60 149 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 UNC5BQ8IZJ1 945 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 GSDMBQ8TAX9 411 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 RAB3IL1Q8TBN0 382 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 PCDH18Q9HCL0 1135 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 XAB2Q9HCS7 855 aaKnown RBP8.77□□□□□ -1.01
TRIM55-204ENST00000353317 CNGB3Q9NQW8 809 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 THAP1Q9NVV9 213 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 PDP2Q9P2J9 529 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 SOX13Q9UN79 622 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 SNX10Q9Y5X0 201 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 CDY1Q9Y6F8 540 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 XIRP2A4UGR9 3374 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 SF3B1O75533 1304 aaKnown RBP eCLIP8.77□□□□□ -1.01
TRIM55-204ENST00000353317 ABHD14A-ACY1A0A1B0GW23 586 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 BCLAF3A2AJT9 711 aaKnown RBP8.77□□□□□ -1.01
TRIM55-204ENST00000353317 WDR27A2RRH5 827 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 MTMR11A4FU01 709 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 APOL1O14791 398 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 SORBS2O94875 1100 aaKnown RBP8.77□□□□□ -1.01
TRIM55-204ENST00000353317 LTFP02788 710 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 NCAM1P13591 858 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 NOS2P35228 1153 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 ALDH7A1P49419 539 aaKnown RBP8.77□□□□□ -1.01
TRIM55-204ENST00000353317 SLC10A2Q12908 348 aaPredicted RBP8.77□□□□□ -1.01
TRIM55-204ENST00000353317 TBCCQ15814 346 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 FASTKD1Q53R41 847 aaKnown RBP8.77□□□□□ -1.01
TRIM55-204ENST00000353317 RALGPS1Q5JS13 557 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 TMCO4Q5TGY1 634 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 SLC9A4Q6AI14 798 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 C16orf46Q6P387 395 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 KYAT3Q6YP21 454 aaKnown RBP8.77□□□□□ -1.01
TRIM55-204ENST00000353317 MAP7D3Q8IWC1 876 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 TP53INP2Q8IXH6 220 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 POU5F2Q8N7G0 328 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 PIWIL2Q8TC59 973 aaKnown RBP8.77□□□□□ -1.01
TRIM55-204ENST00000353317 PYDC1Q8WXC3 89 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 LRRC39Q96DD0 335 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 KCTD15Q96SI1 283 aaPredicted RBP8.77□□□□□ -1.01
TRIM55-204ENST00000353317 EBNA1BP2Q99848 306 aaKnown RBP8.77□□□□□ -1.01
TRIM55-204ENST00000353317 CLSTN3Q9BQT9 956 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 TMEM175Q9BSA9 504 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 TTPALQ9BTX7 342 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 MRPL9Q9BYD2 267 aaKnown RBP8.77□□□□□ -1.01
TRIM55-204ENST00000353317 GPAMQ9HCL2 828 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 SLC17A6Q9P2U8 582 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 NR2E3Q9Y5X4 410 aa8.77□□□□□ -1.01
TRIM55-204ENST00000353317 MYO9BQ13459 2157 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 HOXA2O43364 376 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 RNASEH1O60930 286 aaKnown RBP8.76□□□□□ -1.01
TRIM55-204ENST00000353317 TGM2P21980 687 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 DUSP4Q13115 394 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 BIRC2Q13490 618 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 EIF4EBP2Q13542 120 aaPredicted RBP8.76□□□□□ -1.01
TRIM55-204ENST00000353317 LRRC36Q1X8D7 754 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 PPP6R3Q5H9R7 873 aaPredicted RBP8.76□□□□□ -1.01
TRIM55-204ENST00000353317 RABGAP1LQ5R372 815 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 MCUQ8NE86 351 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 SLC7A14Q8TBB6 771 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 EBF3Q9H4W6 596 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 SFMBT1Q9UHJ3 866 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 EMCNQ9ULC0 261 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 SHROOM3Q8TF72 1996 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 SEC24AO95486 1093 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 ALDOAP04075 364 aaKnown RBP8.76□□□□□ -1.01
TRIM55-204ENST00000353317 FGF3P11487 239 aaPredicted RBP8.76□□□□□ -1.01
TRIM55-204ENST00000353317 ATF6P18850 670 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 KCNA4P22459 653 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 PAX3P23760 479 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 OR1D2P34982 312 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 RFC2P35250 354 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 RPL10AP62906 217 aaKnown RBP8.76□□□□□ -1.01
TRIM55-204ENST00000353317 GPR17Q13304 367 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 PDK2Q15119 407 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 BOLA3Q53S33 107 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 TEDDM1Q5T9Z0 273 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 MBLAC2Q68D91 279 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 STRADAQ7RTN6 431 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 MAVSQ7Z434 540 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 WDR75Q8IWA0 830 aaKnown RBP8.76□□□□□ -1.01
TRIM55-204ENST00000353317 SLC39A11Q8N1S5 342 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 FBXO22Q8NEZ5 403 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 DEPDC1BQ8WUY9 529 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 GBP5Q96PP8 586 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 TRIM4Q9C037 500 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 FAM192AQ9GZU8 254 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 DHX35Q9H5Z1 703 aaKnown RBP8.76□□□□□ -1.01
TRIM55-204ENST00000353317 S100A14Q9HCY8 104 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 MOCS1Q9NZB8 636 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 FZD10Q9ULW2 581 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 AP4E1Q9UPM8 1137 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 DNAJC16Q9Y2G8 782 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 ANAPC1Q9H1A4 1944 aa8.76□□□□□ -1.01
TRIM55-204ENST00000353317 A0A1W2PQH9 124 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 LCHNA4D1U4 455 aa8.75□□□□□ -1.01
TRIM55-204ENST00000353317 ANKRD33BA6NCL7 494 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms