RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 MCMBPQ9BTE3 642 aa16.96■□□□□ 0.31
SAMM50-201ENST00000350028 CRISPLD1Q9H336 500 aa16.96■□□□□ 0.31
SAMM50-201ENST00000350028 SLC38A8A6NNN8 435 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 NT5C1B-RDH14C9J2C7 533 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 TOP3BO95985 862 aaKnown RBP16.96■□□□□ 0.3
SAMM50-201ENST00000350028 PEX11BO96011 259 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 CXCL10P02778 98 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 HSPA1AP0DMV8 641 aaKnown RBP16.96■□□□□ 0.3
SAMM50-201ENST00000350028 HSPA1BP0DMV9 641 aaKnown RBP16.96■□□□□ 0.3
SAMM50-201ENST00000350028 T-ENOLP0DO92 83 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 MYL2P10916 166 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 LBX1P52954 281 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 ZBTB16Q05516 673 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 DUSP4Q13115 394 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 SMAD1Q15797 465 aaKnown RBP16.96■□□□□ 0.3
SAMM50-201ENST00000350028 SNCBQ16143 134 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 PPM1JQ5JR12 505 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 FBXL22Q6P050 247 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 RANBP10Q6VN20 620 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 MIB1Q86YT6 1006 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 SUGP1Q8IWZ8 645 aaKnown RBP16.96■□□□□ 0.3
SAMM50-201ENST00000350028 LRRC43Q8N309 656 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.96■□□□□ 0.3
SAMM50-201ENST00000350028 NSMCE1Q8WV22 266 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 ZNF419Q96HQ0 510 aaPredicted RBP16.96■□□□□ 0.3
SAMM50-201ENST00000350028 MRGPRX2Q96LB1 330 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 TMEM237Q96Q45 408 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 CDK5RAP1Q96SZ6 601 aaKnown RBP16.96■□□□□ 0.3
SAMM50-201ENST00000350028 TTLL2Q9BWV7 592 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 FSD1LQ9BXM9 530 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 UBE2OQ9C0C9 1292 aaKnown RBP16.96■□□□□ 0.3
SAMM50-201ENST00000350028 LRMDAQ9H2I8 198 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 HCSTQ9UBK5 93 aa16.96■□□□□ 0.3
SAMM50-201ENST00000350028 CCDC195A0A1B0GUA6 201 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 PMPCBO75439 489 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 CNTN5O94779 1100 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 HAUS5O94927 633 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 ATP5BP06576 529 aaKnown RBP16.95■□□□□ 0.3
SAMM50-201ENST00000350028 GRK2P25098 689 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 IRX4P78413 519 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 TNK2Q07912 1038 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 UGP2Q16851 508 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 ALFQ53S48 1182 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 MARC1Q5VT66 337 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 CES4AQ5XG92 561 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 RAP1GAP2Q684P5 730 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 MBLAC2Q68D91 279 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 KDELC1Q6UW63 502 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 TAS1R1Q7RTX1 841 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 TFAP2DQ7Z6R9 452 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 AZIN2Q96A70 460 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 SKA1Q96BD8 255 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 HMCESQ96FZ2 354 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 SIKE1Q9BRV8 207 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 PRKD2Q9BZL6 878 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 SP110Q9HB58 689 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 ARNT2Q9HBZ2 717 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 VPS45Q9NRW7 570 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 TMEM216Q9P0N5 145 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 HAO1Q9UJM8 370 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 HBS1LQ9Y450 684 aaKnown RBP16.95■□□□□ 0.3
SAMM50-201ENST00000350028 TCAF1Q9Y4C2 921 aa16.95■□□□□ 0.3
SAMM50-201ENST00000350028 TRAFD1O14545 582 aaPredicted RBP16.94■□□□□ 0.3
SAMM50-201ENST00000350028 SERPINE1P05121 402 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 PRKCGP05129 697 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 FGF3P11487 239 aaPredicted RBP16.94■□□□□ 0.3
SAMM50-201ENST00000350028 PAMP19021 973 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 TARSP26639 723 aaKnown RBP16.94■□□□□ 0.3
SAMM50-201ENST00000350028 POLD2P49005 469 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 YBEYP58557 167 aaPredicted RBP16.94■□□□□ 0.3
SAMM50-201ENST00000350028 POU6F1Q14863 301 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 PCLAFQ15004 111 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 FAM91A1Q658Y4 838 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 CMC1Q7Z7K0 106 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 ARID3BQ8IVW6 561 aaPredicted RBP16.94■□□□□ 0.3
SAMM50-201ENST00000350028 CNTN4Q8IWV2 1026 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 KIF2BQ8N4N8 673 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 TEX26Q8N6G2 289 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 FBXO22Q8NEZ5 403 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 GIPC2Q8TF65 315 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 IGSF8Q969P0 613 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 IMP4Q96G21 291 aaKnown RBP16.94■□□□□ 0.3
SAMM50-201ENST00000350028 VPS39Q96JC1 886 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 ZNF778Q96MU6 729 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 GPR22Q99680 433 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 RHOJQ9H4E5 214 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 LNPEPQ9UIQ6 1025 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 TRIM33Q9UPN9 1127 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 ANKRD6Q9Y2G4 727 aa16.94■□□□□ 0.3
SAMM50-201ENST00000350028 A0A096LPK6 155 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 PQBP1O60828 265 aaKnown RBP16.93■□□□□ 0.3
SAMM50-201ENST00000350028 HMBSP08397 361 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 KRT16P08779 473 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 SERPINB3P29508 390 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 MAPKAPK2P49137 400 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 TUFMP49411 452 aaKnown RBP16.93■□□□□ 0.3
SAMM50-201ENST00000350028 WNT3AP56704 352 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 IL10RBQ08334 325 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 CTC1Q2NKJ3 1217 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 PARP15Q460N3 678 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms