RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 NLRP4Q96MN2 994 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 ERGIC2Q96RQ1 377 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 Q9H521 79 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 KCNK13Q9HB14 408 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 AJAP1Q9UKB5 411 aaPredicted RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 ZNF711Q9Y462 761 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 CFAP20Q9Y6A4 193 aaKnown RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 ZNF532Q9HCE3 1301 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 CEMIPQ8WUJ3 1361 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 GSG1L2A8MUP6 293 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 TADA2AO75478 443 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 LRIG2O94898 1065 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 ACADSP16219 412 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 MAP4P27816 1152 aaKnown RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 STARP49675 285 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 CCNHP51946 323 aaPredicted RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 ATP2C1P98194 919 aaPredicted RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 RAB39AQ14964 217 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 KPNB1Q14974 876 aaKnown RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 ALX1Q15699 326 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 INAQ16352 499 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 PARP10Q53GL7 1025 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 HHATQ5VTY9 493 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 CYP20A1Q6UW02 462 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 ERMP1Q7Z2K6 904 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 KCNK18Q7Z418 384 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 ANKRD13CQ8N6S4 541 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 C19orf47Q8N9M1 422 aaKnown RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 USP38Q8NB14 1042 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 RASGRP4Q8TDF6 673 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 DNAJC9Q8WXX5 260 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 SYN2Q92777 582 aaPredicted RBP6.08□□□□□ -1.44
RFC1-201ENST00000349703 LY9Q9HBG7 655 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 KLHL1Q9NR64 748 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 SMYD2Q9NRG4 433 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 PLCL2Q9UPR0 1127 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 GDAQ9Y2T3 454 aa6.08□□□□□ -1.44
RFC1-201ENST00000349703 MEI4A8MW99 385 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 K7ERI5 159 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 BTN3A1O00481 513 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 PIP5K1CO60331 668 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 PKLRP30613 574 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 GCLCP48506 637 aaPredicted RBP6.07□□□□□ -1.44
RFC1-201ENST00000349703 PDE1BQ01064 536 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 DHX34Q14147 1143 aaKnown RBP6.07□□□□□ -1.44
RFC1-201ENST00000349703 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.07□□□□□ -1.44
RFC1-201ENST00000349703 PDXDC1Q6P996 788 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 COL23A1Q86Y22 540 aaPredicted RBP6.07□□□□□ -1.44
RFC1-201ENST00000349703 ANKLE1Q8NAG6 615 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 MIGA1Q8NAN2 632 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 ANKRD49Q8WVL7 239 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 CXorf58Q96LI9 332 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 TMEM60Q9H2L4 133 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 MTG2Q9H4K7 406 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 RAB9BQ9NP90 201 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 SNTG1Q9NSN8 517 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 ATXN7L1Q9ULK2 861 aaPredicted RBP6.07□□□□□ -1.44
RFC1-201ENST00000349703 MINPP1Q9UNW1 487 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 KCNE2Q9Y6J6 123 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 USH1CQ9Y6N9 552 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 ABCB11O95342 1321 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 MYPNQ86TC9 1320 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 GOLGA8QA0A0J9YX86 632 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 DENND3A2RUS2 1198 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 GOLGA8OA6NCC3 632 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 GOLGA8NF8WBI6 632 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 PGRMC2O15173 223 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 TRIAP1O43715 76 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 METTL18O95568 372 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 FESP07332 822 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 CSH1P0DML2 217 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 CSH2P0DML3 217 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 OR3A3P47888 321 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 OR3A2P47893 321 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 CDK8P49336 464 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 PGDP52209 483 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 RAB25P57735 213 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 RAPSNQ13702 412 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 RABL6Q3YEC7 729 aaPredicted RBP6.07□□□□□ -1.44
RFC1-201ENST00000349703 BLIDQ8IZY5 108 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 ZNF610Q8N9Z0 462 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 POGLUT1Q8NBL1 392 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 B4GALNT2Q8NHY0 566 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 WDR92Q96MX6 357 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 CCDC3Q9BQI4 270 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 WDR18Q9BV38 432 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 OSGEPL1Q9H4B0 414 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 ERVK-18Q9QC07 812 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 FAM208AQ9UK61 1670 aaKnown RBP6.07□□□□□ -1.44
RFC1-201ENST00000349703 TNKSO95271 1327 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 SOS2Q07890 1332 aaPredicted RBP6.07□□□□□ -1.44
RFC1-201ENST00000349703 TCRBV7S2A1N4TA0A589 114 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 FAM234BA2RU67 622 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 GRM6O15303 877 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 CALUO43852 315 aaPredicted RBP6.07□□□□□ -1.44
RFC1-201ENST00000349703 PROS1P07225 676 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 SCG2P13521 617 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 GFAPP14136 432 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 CREB1P16220 341 aa6.07□□□□□ -1.44
RFC1-201ENST00000349703 NRG1Q02297 640 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms