RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PID1Q7Z2X4 250 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 TRIM31Q9BZY9 425 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 GDF3Q9NR23 364 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 ATP8A1Q9Y2Q0 1164 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 MYO10Q9HD67 2058 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 MIA3Q5JRA6 1907 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 METTL18O95568 372 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 ADCY8P40145 1251 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 CTSOP43234 321 aaPredicted RBP27.55■■■□□ 2
SSBP4-202ENST00000348495 RPL21P46778 160 aaKnown RBP27.55■■■□□ 2
SSBP4-202ENST00000348495 SOX9P48436 509 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 GEMIN4P57678 1058 aaKnown RBP27.55■■■□□ 2
SSBP4-202ENST00000348495 SLC20A2Q08357 652 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 CYTH1Q15438 398 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 ARHGEF18Q6ZSZ5 1173 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 EPB41L5Q9HCM4 733 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 HS3ST2Q9Y278 367 aa27.55■■■□□ 2
SSBP4-202ENST00000348495 SERPINH1P50454 418 aaKnown RBP27.54■■■□□ 2
SSBP4-202ENST00000348495 TDGQ13569 410 aa27.54■■■□□ 2
SSBP4-202ENST00000348495 PGBD5Q8N414 524 aa27.54■■■□□ 2
SSBP4-202ENST00000348495 TERB1Q8NA31 727 aa27.54■■■□□ 2
SSBP4-202ENST00000348495 CASKIN2Q8WXE0 1202 aa27.54■■■□□ 2
SSBP4-202ENST00000348495 PSKH2Q96QS6 385 aa27.54■■■□□ 2
SSBP4-202ENST00000348495 PNKPQ96T60 521 aa27.54■■■□□ 2
SSBP4-202ENST00000348495 GBA3Q9H227 469 aa27.54■■■□□ 2
SSBP4-202ENST00000348495 SEPT3Q9UH03 358 aa27.54■■■□□ 2
SSBP4-202ENST00000348495 SNX24Q9Y343 169 aa27.54■■■□□ 2
SSBP4-202ENST00000348495 ESYT3A0FGR9 886 aa27.53■■■□□ 2
SSBP4-202ENST00000348495 PRRT4C9JH25 899 aa27.53■■■□□ 2
SSBP4-202ENST00000348495 POLR2EP19388 210 aaKnown RBP27.53■■■□□ 2
SSBP4-202ENST00000348495 ECT2LQ008S8 904 aa27.53■■■□□ 2
SSBP4-202ENST00000348495 KDSRQ06136 332 aa27.53■■■□□ 2
SSBP4-202ENST00000348495 PARP6Q2NL67 630 aa27.53■■■□□ 2
SSBP4-202ENST00000348495 GPR161Q8N6U8 529 aaKnown RBP27.53■■■□□ 2
SSBP4-202ENST00000348495 DPH5Q9H2P9 285 aa27.53■■■□□ 2
SSBP4-202ENST00000348495 SLC2A4RGQ9NR83 387 aa27.53■■■□□ 2
SSBP4-202ENST00000348495 GRHL1Q9NZI5 618 aa27.53■■■□□ 2
SSBP4-202ENST00000348495 MUSKO15146 869 aa27.53■■■□□ 2
SSBP4-202ENST00000348495 TP73O15350 636 aa27.53■■■□□ 2
SSBP4-202ENST00000348495 NARSO43776 548 aaKnown RBP27.53■■■□□ 2
SSBP4-202ENST00000348495 TMCC1O94876 653 aa27.53■■■□□ 2
SSBP4-202ENST00000348495 SEC31AO94979 1220 aaKnown RBP27.53■■■□□ 2
SSBP4-202ENST00000348495 ALG1LQ6GMV1 187 aa27.53■■■□□ 2
SSBP4-202ENST00000348495 ITPRIPL1Q6GPH6 555 aa27.53■■■□□ 2
SSBP4-202ENST00000348495 RUBCNQ92622 972 aa27.53■■■□□ 2
SSBP4-202ENST00000348495 LRRC45Q96CN5 670 aa27.53■■■□□ 2
SSBP4-202ENST00000348495 GORASP1Q9BQQ3 440 aa27.53■■■□□ 2
SSBP4-202ENST00000348495 NT5MQ9NPB1 228 aa27.53■■■□□ 2
SSBP4-202ENST00000348495 K7ERQ8 282 aa27.52■■■□□ 2
SSBP4-202ENST00000348495 SRFP11831 508 aa27.52■■■□□ 2
SSBP4-202ENST00000348495 NFKB1P19838 968 aa27.52■■■□□ 2
SSBP4-202ENST00000348495 CTHP32929 405 aa27.52■■■□□ 2
SSBP4-202ENST00000348495 VASPP50552 380 aaPredicted RBP27.52■■■□□ 2
SSBP4-202ENST00000348495 ZNF235Q14590 738 aa27.52■■■□□ 2
SSBP4-202ENST00000348495 EIF4HQ15056 248 aaKnown RBP27.52■■■□□ 2
SSBP4-202ENST00000348495 METTL3Q86U44 580 aaKnown RBP27.52■■■□□ 2
SSBP4-202ENST00000348495 TSEN2Q8NCE0 465 aaKnown RBP27.52■■■□□ 2
SSBP4-202ENST00000348495 MYO18AQ92614 2054 aaKnown RBP27.52■■■□□ 2
SSBP4-202ENST00000348495 SNF8Q96H20 258 aa27.52■■■□□ 2
SSBP4-202ENST00000348495 MGME1Q9BQP7 344 aa27.52■■■□□ 2
SSBP4-202ENST00000348495 ETNK1Q9HBU6 452 aa27.52■■■□□ 2
SSBP4-202ENST00000348495 GLOD4Q9HC38 313 aa27.52■■■□□ 2
SSBP4-202ENST00000348495 RAB6BQ9NRW1 208 aa27.52■■■□□ 2
SSBP4-202ENST00000348495 ELOVL2Q9NXB9 296 aa27.52■■■□□ 2
SSBP4-202ENST00000348495 WHRNQ9P202 907 aa27.52■■■□□ 2
SSBP4-202ENST00000348495 C19orf67A6NJJ6 358 aa27.51■■□□□ 1.99
SSBP4-202ENST00000348495 SPECC1L-ADORA2AF8WAN1 911 aa27.51■■□□□ 1.99
SSBP4-202ENST00000348495 SMAD6O43541 496 aaKnown RBP27.51■■□□□ 1.99
SSBP4-202ENST00000348495 KAT7O95251 611 aa27.51■■□□□ 1.99
SSBP4-202ENST00000348495 PSMB4P28070 264 aa27.51■■□□□ 1.99
SSBP4-202ENST00000348495 STK19P49842 368 aaPredicted RBP27.51■■□□□ 1.99
SSBP4-202ENST00000348495 PFKPQ01813 784 aa27.51■■□□□ 1.99
SSBP4-202ENST00000348495 ELF2Q15723 593 aa27.51■■□□□ 1.99
SSBP4-202ENST00000348495 PREPLQ4J6C6 727 aaPredicted RBP27.51■■□□□ 1.99
SSBP4-202ENST00000348495 SFTPA1Q8IWL2 248 aa27.51■■□□□ 1.99
SSBP4-202ENST00000348495 IFT20Q8IY31 132 aa27.51■■□□□ 1.99
SSBP4-202ENST00000348495 TAB3Q8N5C8 712 aaPredicted RBP27.51■■□□□ 1.99
SSBP4-202ENST00000348495 RPL10LQ96L21 214 aaKnown RBP27.51■■□□□ 1.99
SSBP4-202ENST00000348495 MRGPRX3Q96LB0 322 aa27.51■■□□□ 1.99
SSBP4-202ENST00000348495 CINPQ9BW66 212 aaPredicted RBP27.51■■□□□ 1.99
SSBP4-202ENST00000348495 LHX3Q9UBR4 397 aa27.51■■□□□ 1.99
SSBP4-202ENST00000348495 RSPH14Q9UHP6 348 aa27.51■■□□□ 1.99
SSBP4-202ENST00000348495 ERVW-1Q9UQF0 538 aa27.51■■□□□ 1.99
SSBP4-202ENST00000348495 COL6A3P12111 3177 aa27.51■■□□□ 1.99
SSBP4-202ENST00000348495 DNALI1O14645 258 aaPredicted RBP27.5■■□□□ 1.99
SSBP4-202ENST00000348495 TIMM44O43615 452 aa27.5■■□□□ 1.99
SSBP4-202ENST00000348495 ASLP04424 464 aa27.5■■□□□ 1.99
SSBP4-202ENST00000348495 DLDP09622 509 aaKnown RBP27.5■■□□□ 1.99
SSBP4-202ENST00000348495 SRCP12931 536 aa27.5■■□□□ 1.99
SSBP4-202ENST00000348495 FDFT1P37268 417 aa27.5■■□□□ 1.99
SSBP4-202ENST00000348495 GRIA2P42262 883 aa27.5■■□□□ 1.99
SSBP4-202ENST00000348495 SEMA5AQ13591 1074 aa27.5■■□□□ 1.99
SSBP4-202ENST00000348495 PTPRNQ16849 979 aa27.5■■□□□ 1.99
SSBP4-202ENST00000348495 RALGPS2Q86X27 583 aaPredicted RBP27.5■■□□□ 1.99
SSBP4-202ENST00000348495 KLHDC8BQ8IXV7 354 aa27.5■■□□□ 1.99
SSBP4-202ENST00000348495 BBS5Q8N3I7 341 aa27.5■■□□□ 1.99
SSBP4-202ENST00000348495 SH2D3CQ8N5H7 860 aa27.5■■□□□ 1.99
SSBP4-202ENST00000348495 SORCS1Q8WY21 1168 aa27.5■■□□□ 1.99
SSBP4-202ENST00000348495 FCRL5Q96RD9 977 aa27.5■■□□□ 1.99
SSBP4-202ENST00000348495 C8orf33Q9H7E9 229 aaPredicted RBP27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms