RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 WDR45BQ5MNZ6 344 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 N4BP2L1Q5TBK1 243 aaPredicted RBP11.04□□□□□ -0.64
CLCN6-202ENST00000346436 LBX2Q6XYB7 198 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 C16orf59Q7L2K0 433 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 RNF148Q8N7C7 305 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 STK32AQ8WU08 396 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 BTN2A2Q8WVV5 523 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 EDEM1Q92611 657 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 FAM136AQ96C01 138 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 TLCD1Q96CP7 247 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 APOPT1Q96IL0 206 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 CEP19Q96LK0 163 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 POPDC2Q9HBU9 364 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 LRRC4CQ9HCJ2 640 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 RBM22Q9NW64 420 aaKnown RBP eCLIP11.04□□□□□ -0.642e-9■■■■■ 31.6
CLCN6-202ENST00000346436 A0A0G2JLL6 359 aaPredicted RBP11.04□□□□□ -0.64
CLCN6-202ENST00000346436 MPOP05164 745 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 TPH1P17752 444 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 TGM2P21980 687 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 RANBP1P43487 201 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 PAGE2BQ5JRK9 111 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 PRRT2Q7Z6L0 340 aaPredicted RBP11.04□□□□□ -0.64
CLCN6-202ENST00000346436 STK40Q8N2I9 435 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 JOSD2Q8TAC2 188 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 VCPIP1Q96JH7 1222 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 CNBD2Q96M20 576 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 PSME2Q9UL46 239 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 TLL2Q9Y6L7 1015 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 LAMA4Q16363 1823 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 TBL1XO60907 577 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 TCF3P15923 654 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 PPP2R1BP30154 601 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 NOS2P35228 1153 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 DGKEP52429 567 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 IFNEQ86WN2 208 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 ADAM32Q8TC27 787 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 FEM1CQ96JP0 617 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 PRKD2Q9BZL6 878 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 ZDHHC18Q9NUE0 388 aa11.04□□□□□ -0.64
CLCN6-202ENST00000346436 DUS2Q9NX74 493 aaKnown RBP11.04□□□□□ -0.64
CLCN6-202ENST00000346436 NOCTQ9UK39 431 aaKnown RBP11.04□□□□□ -0.64
CLCN6-202ENST00000346436 SRRM3A6NNA2 597 aaPredicted RBP11.03□□□□□ -0.64
CLCN6-202ENST00000346436 SYN3O14994 580 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 PER2O15055 1255 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 CES1P23141 567 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 ZNHIT3Q15649 155 aaPredicted RBP11.03□□□□□ -0.64
CLCN6-202ENST00000346436 ZACNQ401N2 412 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 PDE12Q6L8Q7 609 aaKnown RBP11.03□□□□□ -0.64
CLCN6-202ENST00000346436 AGMOQ6ZNB7 445 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 TTC7BQ86TV6 843 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 DAW1Q8N136 415 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 HEXDCQ8WVB3 486 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 CMTM5Q96DZ9 223 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 SLC39A8Q9C0K1 460 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 ASB3Q9Y575 518 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 RHPN2P1A8MT19 583 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 B4GALT5O43286 388 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 MT-CO1P00395 513 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 ENO2P09104 434 aaPredicted RBP11.03□□□□□ -0.64
CLCN6-202ENST00000346436 ATP6V1C1P21283 382 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 SLC1A5Q15758 541 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 SGO1Q5FBB7 561 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 XKR4Q5GH76 650 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 VSTM1Q6UX27 236 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 OTOAQ7RTW8 1153 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 POLNQ7Z5Q5 900 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 ECHDC2Q86YB7 292 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 COLGALT1Q8NBJ5 622 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 RFWD2Q8NHY2 731 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 GRIN3AQ8TCU5 1115 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 SLC2A14Q8TDB8 520 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 C2orf15Q8WU43 125 aaKnown RBP11.03□□□□□ -0.64
CLCN6-202ENST00000346436 RMND5AQ9H871 391 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 MIEF1Q9NQG6 463 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 SYBUQ9NX95 663 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 RNF186Q9NXI6 227 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 TAGLN3Q9UI15 199 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 hCG_1818297A0A087WSY0 165 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 FAM155BO75949 473 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 KRT36O76013 467 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 COX7A2P14406 83 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 AKT2P31751 481 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 TBC1D25Q3MII6 688 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 SH3GL3Q99963 347 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 POLR1EQ9GZS1 481 aaKnown RBP11.03□□□□□ -0.64
CLCN6-202ENST00000346436 IARS2Q9NSE4 1012 aaKnown RBP11.03□□□□□ -0.64
CLCN6-202ENST00000346436 V9GYQ6 96 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 PHLPP1O60346 1717 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 NUP188Q5SRE5 1749 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 GSNP06396 782 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 NFICP08651 508 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 PCNAP12004 261 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 ZNF24P17028 368 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 MGAT1P26572 445 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 CAPSQ13938 189 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 TRABD2AQ86V40 505 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 METTL21AQ8WXB1 218 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 MFSD14AQ96MC6 490 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 KCNS3Q9BQ31 491 aa11.03□□□□□ -0.64
CLCN6-202ENST00000346436 PIPSLA2A3N6 862 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms