RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 EDEM1Q92611 657 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 MRPS31Q92665 395 aaKnown RBP13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 RTP4Q96DX8 246 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 SPATA17Q96L03 361 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 CEP295NLQ96MC4 621 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 PHACTR1Q9C0D0 580 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 PABPC3Q9H361 631 aaKnown RBP13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 IL37Q9NZH6 218 aa13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 TPX2Q9ULW0 747 aaKnown RBP13.83□□□□□ -0.2
HERPUD1-202ENST00000344114 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 FAM92AA1XBS5 289 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 SRRM3A6NNA2 597 aaPredicted RBP13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 HACD1B0YJ81 288 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 EEF2KO00418 725 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 KHNYNO15037 678 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 NUDT17P0C025 328 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 CSH1P0DML2 217 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 CSH2P0DML3 217 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 GOT1P17174 413 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 ACTN2P35609 894 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 HCAR3P49019 387 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 DGKEP52429 567 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 GDF10P55107 478 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 RPL10AP62906 217 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 IFRD2Q12894 506 aaPredicted RBP13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 USP4Q13107 963 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 SEMA3BQ13214 749 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 RNASEH2BQ5TBB1 312 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 DENND2CQ68D51 928 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 MSANTD2Q6P1R3 559 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 C4orf22Q6V702 233 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 RELL1Q8IUW5 271 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 UNC45BQ8IWX7 931 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 PYROXD2Q8N2H3 581 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 ZCCHC9Q8N567 271 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 GLIS1Q8NBF1 620 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 QKIQ96PU8 341 aaKnown RBP eCLIP13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 SCNM1Q9BWG6 230 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 WDCPQ9H6R7 721 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 ARHGEF4Q9NR80 690 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 HEY1Q9Y5J3 304 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 RAD54BQ9Y620 910 aa13.82□□□□□ -0.2
HERPUD1-202ENST00000344114 IGF2RP11717 2491 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 GOLGA6L10A6NI86 522 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 PATE3B3GLJ2 98 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 ZSCAN5DPP0CG00 497 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 ETS1P14921 441 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 HTR7P34969 479 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 GPR15P49685 360 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 PSEN1P49768 467 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 TPI1P60174 286 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 DPYSQ14117 519 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 PAFAH1B3Q15102 231 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 EML3Q32P44 896 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 USP39Q53GS9 565 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 SLC45A4Q5BKX6 768 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 RFX8Q6ZV50 586 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 CYP2U1Q7Z449 544 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 CROCCP2Q86T23 111 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 ZC3H18Q86VM9 953 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 CCDC25Q86WR0 208 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 PPIL6Q8IXY8 311 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 STKLD1Q8NE28 680 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 TSTD1Q8NFU3 115 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 ADAM32Q8TC27 787 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 ATP2A3Q93084 1043 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 TRMT2BQ96GJ1 504 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 SERPINB11Q96P15 392 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 EPAS1Q99814 870 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 TPSD1Q9BZJ3 242 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 OLA1Q9NTK5 396 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 DUS2Q9NX74 493 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 ARHGEF38Q9NXL2 777 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 PAK5Q9P286 719 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 UXTQ9UBK9 157 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 EVLQ9UI08 416 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 NFS1Q9Y697 457 aa13.81□□□□□ -0.2
HERPUD1-202ENST00000344114 ASCC3Q8N3C0 2202 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 A0A1W2PQH9 124 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 RIPK2O43353 540 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 CREB3O43889 395 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 TCF3P15923 654 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 BCKDHBP21953 392 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 AMPD1P23109 780 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 RPL22P35268 128 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 CHKAP35790 457 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 IRX4P78413 519 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 GABPB1Q06547 395 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 EIF4EBP2Q13542 120 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 DDR2Q16832 855 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 CEP85LQ5SZL2 805 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 DENND5BQ6ZUT9 1274 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 SCD5Q86SK9 330 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 PRUNE1Q86TP1 453 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 FAM71DQ8N9W8 422 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 USP33Q8TEY7 942 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 RNF34Q969K3 372 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 MYRFLQ96LU7 910 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 OLFM3Q96PB7 478 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 FERMT1Q9BQL6 677 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms